RNA–Protein interactions for RNA: ENST00000339475.9

OTX2-201, Transcript of orthodenticle homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene OTX2, Length 3,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTX2-201ENST00000339475 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
OTX2-201ENST00000339475 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
OTX2-201ENST00000339475 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
OTX2-201ENST00000339475 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
OTX2-201ENST00000339475 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
OTX2-201ENST00000339475 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
OTX2-201ENST00000339475 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
OTX2-201ENST00000339475 ABCC9O60706 1549 aa13.6□□□□□ -0.23
OTX2-201ENST00000339475 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
OTX2-201ENST00000339475 HRCP23327 699 aa13.56□□□□□ -0.24
OTX2-201ENST00000339475 MYO15BQ96JP2 1530 aa13.5□□□□□ -0.25
OTX2-201ENST00000339475 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
OTX2-201ENST00000339475 NACADO15069 1562 aa13.38□□□□□ -0.27
OTX2-201ENST00000339475 MYT1Q01538 1121 aa13.37□□□□□ -0.27
OTX2-201ENST00000339475 SCRIBQ14160 1630 aa13.37□□□□□ -0.27
OTX2-201ENST00000339475 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
OTX2-201ENST00000339475 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
OTX2-201ENST00000339475 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
OTX2-201ENST00000339475 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
OTX2-201ENST00000339475 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
OTX2-201ENST00000339475 CECR2Q9BXF3 1484 aa13.06□□□□□ -0.32
OTX2-201ENST00000339475 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
OTX2-201ENST00000339475 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
OTX2-201ENST00000339475 CHIC1Q5VXU3 224 aa12.91□□□□□ -0.34
OTX2-201ENST00000339475 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
OTX2-201ENST00000339475 WIZO95785 1651 aa12.87□□□□□ -0.35
OTX2-201ENST00000339475 BAZ1AQ9NRL2 1556 aaPredicted RBP12.84□□□□□ -0.35
OTX2-201ENST00000339475 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
OTX2-201ENST00000339475 BCL11AQ9H165 835 aa12.77□□□□□ -0.36
OTX2-201ENST00000339475 GTF3C3Q9Y5Q9 886 aa12.76□□□□□ -0.37
OTX2-201ENST00000339475 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
OTX2-201ENST00000339475 PRKCSHP14314 528 aaPredicted RBP12.72□□□□□ -0.37
OTX2-201ENST00000339475 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
OTX2-201ENST00000339475 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
OTX2-201ENST00000339475 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
OTX2-201ENST00000339475 TTBK1Q5TCY1 1321 aaPredicted RBP12.63□□□□□ -0.39
OTX2-201ENST00000339475 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
OTX2-201ENST00000339475 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
OTX2-201ENST00000339475 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
OTX2-201ENST00000339475 EIF4G1Q04637 1599 aaKnown RBP12.59□□□□□ -0.39
OTX2-201ENST00000339475 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
OTX2-201ENST00000339475 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
OTX2-201ENST00000339475 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
OTX2-201ENST00000339475 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
OTX2-201ENST00000339475 BAZ1BQ9UIG0 1483 aaKnown RBP12.47□□□□□ -0.41
OTX2-201ENST00000339475 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
OTX2-201ENST00000339475 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
OTX2-201ENST00000339475 NCAPD3P42695 1498 aa12.41□□□□□ -0.42
OTX2-201ENST00000339475 TRIM26Q12899 539 aaPredicted RBP12.4□□□□□ -0.42
OTX2-201ENST00000339475 YTHDC1Q96MU7 727 aaKnown RBP12.37□□□□□ -0.43
OTX2-201ENST00000339475 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
OTX2-201ENST00000339475 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
OTX2-201ENST00000339475 ANP32EQ9BTT0 268 aa12.29□□□□□ -0.44
OTX2-201ENST00000339475 CC2D2AQ9P2K1 1620 aa12.28□□□□□ -0.44
OTX2-201ENST00000339475 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
OTX2-201ENST00000339475 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
OTX2-201ENST00000339475 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
OTX2-201ENST00000339475 SOGA1O94964 1423 aa12.24□□□□□ -0.45
OTX2-201ENST00000339475 DIEXFQ68CQ4 756 aaKnown RBP12.22□□□□□ -0.45
OTX2-201ENST00000339475 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
OTX2-201ENST00000339475 RUSC2Q8N2Y8 1516 aa12.22□□□□□ -0.45
OTX2-201ENST00000339475 CFTRP13569 1480 aa12.19□□□□□ -0.46
OTX2-201ENST00000339475 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
OTX2-201ENST00000339475 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
OTX2-201ENST00000339475 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
OTX2-201ENST00000339475 CUX1P39880 1505 aa12.1□□□□□ -0.47
OTX2-201ENST00000339475 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
OTX2-201ENST00000339475 EEA1Q15075 1411 aa12.08□□□□□ -0.48
OTX2-201ENST00000339475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
OTX2-201ENST00000339475 APLP2Q06481 763 aa12.06□□□□□ -0.48
OTX2-201ENST00000339475 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
OTX2-201ENST00000339475 NESP48681 1621 aa12.03□□□□□ -0.48
OTX2-201ENST00000339475 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
OTX2-201ENST00000339475 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
OTX2-201ENST00000339475 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
OTX2-201ENST00000339475 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
OTX2-201ENST00000339475 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
OTX2-201ENST00000339475 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
OTX2-201ENST00000339475 CEP162Q5TB80 1403 aa11.97□□□□□ -0.49
OTX2-201ENST00000339475 KIF21BO75037 1637 aa11.96□□□□□ -0.49
OTX2-201ENST00000339475 RAPGEF2Q9Y4G8 1499 aa11.96□□□□□ -0.5
OTX2-201ENST00000339475 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
OTX2-201ENST00000339475 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
OTX2-201ENST00000339475 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
OTX2-201ENST00000339475 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
OTX2-201ENST00000339475 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
OTX2-201ENST00000339475 KIF27Q86VH2 1401 aa11.89□□□□□ -0.51
OTX2-201ENST00000339475 MIER1Q8N108 512 aa11.89□□□□□ -0.51
OTX2-201ENST00000339475 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
OTX2-201ENST00000339475 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
OTX2-201ENST00000339475 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
OTX2-201ENST00000339475 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
OTX2-201ENST00000339475 CUX2O14529 1486 aa11.86□□□□□ -0.51
OTX2-201ENST00000339475 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
OTX2-201ENST00000339475 BCANQ96GW7 911 aa11.86□□□□□ -0.51
OTX2-201ENST00000339475 IGF1RP08069 1367 aa11.85□□□□□ -0.51
OTX2-201ENST00000339475 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
OTX2-201ENST00000339475 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
OTX2-201ENST00000339475 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
OTX2-201ENST00000339475 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms