RNA–Protein interactions for RNA: ENST00000394070.6

STAMBP-202, Transcript of STAM binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STAMBP, Length 6,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-202ENST00000394070 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
STAMBP-202ENST00000394070 NISCHQ9Y2I1 1504 aa14.79□□□□□ -0.04
STAMBP-202ENST00000394070 SUPT5HO00267 1087 aaKnown RBP14.35□□□□□ -0.11
STAMBP-202ENST00000394070 SHROOM4Q9ULL8 1493 aa14.32□□□□□ -0.12
STAMBP-202ENST00000394070 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
STAMBP-202ENST00000394070 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
STAMBP-202ENST00000394070 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
STAMBP-202ENST00000394070 RANGAP1P46060 587 aaPredicted RBP13.6□□□□□ -0.23
STAMBP-202ENST00000394070 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
STAMBP-202ENST00000394070 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
STAMBP-202ENST00000394070 PPARGC1BQ86YN6 1023 aaKnown RBP13.17□□□□□ -0.3
STAMBP-202ENST00000394070 APLP2Q06481 763 aa13.14□□□□□ -0.31
STAMBP-202ENST00000394070 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
STAMBP-202ENST00000394070 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
STAMBP-202ENST00000394070 HRCP23327 699 aa12.95□□□□□ -0.34
STAMBP-202ENST00000394070 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
STAMBP-202ENST00000394070 CHIC1Q5VXU3 224 aa12.9□□□□□ -0.34
STAMBP-202ENST00000394070 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
STAMBP-202ENST00000394070 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
STAMBP-202ENST00000394070 ITGAEP38570 1179 aa12.78□□□□□ -0.36
STAMBP-202ENST00000394070 ABCC9O60706 1549 aa12.76□□□□□ -0.37
STAMBP-202ENST00000394070 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
STAMBP-202ENST00000394070 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
STAMBP-202ENST00000394070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
STAMBP-202ENST00000394070 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
STAMBP-202ENST00000394070 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.38
STAMBP-202ENST00000394070 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
STAMBP-202ENST00000394070 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
STAMBP-202ENST00000394070 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
STAMBP-202ENST00000394070 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
STAMBP-202ENST00000394070 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
STAMBP-202ENST00000394070 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
STAMBP-202ENST00000394070 FBLN2P98095 1184 aa12.46□□□□□ -0.41
STAMBP-202ENST00000394070 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
STAMBP-202ENST00000394070 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
STAMBP-202ENST00000394070 MYT1Q01538 1121 aa12.32□□□□□ -0.44
STAMBP-202ENST00000394070 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
STAMBP-202ENST00000394070 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
STAMBP-202ENST00000394070 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.44
STAMBP-202ENST00000394070 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.45
STAMBP-202ENST00000394070 AEBP2Q6ZN18 517 aaPredicted RBP12.26□□□□□ -0.45
STAMBP-202ENST00000394070 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
STAMBP-202ENST00000394070 MYO15BQ96JP2 1530 aa12.22□□□□□ -0.45
STAMBP-202ENST00000394070 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
STAMBP-202ENST00000394070 NEFLP07196 543 aa12.18□□□□□ -0.46
STAMBP-202ENST00000394070 ZNF326Q5BKZ1 582 aaKnown RBP12.17□□□□□ -0.46
STAMBP-202ENST00000394070 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
STAMBP-202ENST00000394070 ERICH6Q7L0X2 663 aa12.14□□□□□ -0.47
STAMBP-202ENST00000394070 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
STAMBP-202ENST00000394070 CCDC180Q9P1Z9 1646 aa12.1□□□□□ -0.47
STAMBP-202ENST00000394070 SENP3Q9H4L4 574 aaPredicted RBP12.1□□□□□ -0.47
STAMBP-202ENST00000394070 ACIN1Q9UKV3 1341 aaKnown RBP12.07□□□□□ -0.48
STAMBP-202ENST00000394070 ZNF777Q9ULD5 760 aaPredicted RBP12.07□□□□□ -0.48
STAMBP-202ENST00000394070 BCL11AQ9H165 835 aa12.04□□□□□ -0.48
STAMBP-202ENST00000394070 SCRIBQ14160 1630 aa12.04□□□□□ -0.48
STAMBP-202ENST00000394070 ZNF316A6NFI3 1004 aaPredicted RBP12.04□□□□□ -0.48
STAMBP-202ENST00000394070 BCANQ96GW7 911 aa12□□□□□ -0.49
STAMBP-202ENST00000394070 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
STAMBP-202ENST00000394070 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
STAMBP-202ENST00000394070 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
STAMBP-202ENST00000394070 RSF1Q96T23 1441 aaPredicted RBP11.91□□□□□ -0.5
STAMBP-202ENST00000394070 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
STAMBP-202ENST00000394070 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
STAMBP-202ENST00000394070 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
STAMBP-202ENST00000394070 TRHP20396 242 aaPredicted RBP11.83□□□□□ -0.52
STAMBP-202ENST00000394070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.522e-7■■□□□ 12.3
STAMBP-202ENST00000394070 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
STAMBP-202ENST00000394070 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
STAMBP-202ENST00000394070 HIRIP3Q9BW71 556 aaPredicted RBP11.74□□□□□ -0.53
STAMBP-202ENST00000394070 CLSPNQ9HAW4 1339 aa11.74□□□□□ -0.53
STAMBP-202ENST00000394070 ANP32CO43423 234 aa11.74□□□□□ -0.53
STAMBP-202ENST00000394070 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
STAMBP-202ENST00000394070 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
STAMBP-202ENST00000394070 MIER1Q8N108 512 aa11.7□□□□□ -0.54
STAMBP-202ENST00000394070 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
STAMBP-202ENST00000394070 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
STAMBP-202ENST00000394070 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
STAMBP-202ENST00000394070 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
STAMBP-202ENST00000394070 ESF1Q9H501 851 aaKnown RBP11.69□□□□□ -0.54
STAMBP-202ENST00000394070 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
STAMBP-202ENST00000394070 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
STAMBP-202ENST00000394070 CLIP1P30622 1438 aa11.66□□□□□ -0.54
STAMBP-202ENST00000394070 EEA1Q15075 1411 aa11.66□□□□□ -0.54
STAMBP-202ENST00000394070 TNIKQ9UKE5 1360 aa11.64□□□□□ -0.55
STAMBP-202ENST00000394070 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
STAMBP-202ENST00000394070 CECR2Q9BXF3 1484 aa11.61□□□□□ -0.55
STAMBP-202ENST00000394070 CDK11AQ9UQ88 783 aaPredicted RBP11.61□□□□□ -0.55
STAMBP-202ENST00000394070 A0A0G2JS52 829 aa11.6□□□□□ -0.55
STAMBP-202ENST00000394070 RRP7BPQ9NSQ0 103 aa11.6□□□□□ -0.55
STAMBP-202ENST00000394070 FKBP8Q14318 412 aa11.59□□□□□ -0.55
STAMBP-202ENST00000394070 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
STAMBP-202ENST00000394070 NACADO15069 1562 aa11.58□□□□□ -0.56
STAMBP-202ENST00000394070 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
STAMBP-202ENST00000394070 WRNQ14191 1432 aaPredicted RBP eCLIP11.56□□□□□ -0.562e-6■■■■□ 22.3
STAMBP-202ENST00000394070 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
STAMBP-202ENST00000394070 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
STAMBP-202ENST00000394070 RGL3Q3MIN7 710 aa11.53□□□□□ -0.56
STAMBP-202ENST00000394070 TONSLQ96HA7 1378 aa11.53□□□□□ -0.56
STAMBP-202ENST00000394070 FAM9BQ8IZU0 186 aa11.53□□□□□ -0.56
STAMBP-202ENST00000394070 CEP164Q9UPV0 1460 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms