RNA–Protein interactions for RNA: ENST00000584884.1

MIR4428-201, Transcript of microRNA 4428, humanhuman

BASIC

Gene MIR4428, Length 73 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4428-201ENST00000584884 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
MIR4428-201ENST00000584884 ABCC9O60706 1549 aa15.02■□□□□ -0
MIR4428-201ENST00000584884 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
MIR4428-201ENST00000584884 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
MIR4428-201ENST00000584884 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
MIR4428-201ENST00000584884 NACADO15069 1562 aa14.2□□□□□ -0.14
MIR4428-201ENST00000584884 ZCCHC6Q5VYS8 1495 aaKnown RBP14.16□□□□□ -0.14
MIR4428-201ENST00000584884 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
MIR4428-201ENST00000584884 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
MIR4428-201ENST00000584884 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
MIR4428-201ENST00000584884 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
MIR4428-201ENST00000584884 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
MIR4428-201ENST00000584884 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
MIR4428-201ENST00000584884 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
MIR4428-201ENST00000584884 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
MIR4428-201ENST00000584884 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
MIR4428-201ENST00000584884 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
MIR4428-201ENST00000584884 CECR2Q9BXF3 1484 aa13.47□□□□□ -0.25
MIR4428-201ENST00000584884 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
MIR4428-201ENST00000584884 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
MIR4428-201ENST00000584884 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
MIR4428-201ENST00000584884 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
MIR4428-201ENST00000584884 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
MIR4428-201ENST00000584884 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
MIR4428-201ENST00000584884 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
MIR4428-201ENST00000584884 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
MIR4428-201ENST00000584884 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.33
MIR4428-201ENST00000584884 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
MIR4428-201ENST00000584884 NESP48681 1621 aa12.99□□□□□ -0.33
MIR4428-201ENST00000584884 WIZO95785 1651 aa12.96□□□□□ -0.33
MIR4428-201ENST00000584884 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
MIR4428-201ENST00000584884 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
MIR4428-201ENST00000584884 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
MIR4428-201ENST00000584884 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.37
MIR4428-201ENST00000584884 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
MIR4428-201ENST00000584884 LAMC3Q9Y6N6 1575 aa12.76□□□□□ -0.37
MIR4428-201ENST00000584884 CCDC88BA6NC98 1476 aa12.74□□□□□ -0.37
MIR4428-201ENST00000584884 CUX2O14529 1486 aa12.72□□□□□ -0.37
MIR4428-201ENST00000584884 CFTRP13569 1480 aa12.72□□□□□ -0.37
MIR4428-201ENST00000584884 FANCD2Q9BXW9 1451 aa12.68□□□□□ -0.38
MIR4428-201ENST00000584884 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
MIR4428-201ENST00000584884 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
MIR4428-201ENST00000584884 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
MIR4428-201ENST00000584884 CEP164Q9UPV0 1460 aa12.63□□□□□ -0.39
MIR4428-201ENST00000584884 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
MIR4428-201ENST00000584884 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
MIR4428-201ENST00000584884 WDR62O43379 1518 aa12.56□□□□□ -0.4
MIR4428-201ENST00000584884 TOPBP1Q92547 1522 aa12.46□□□□□ -0.42
MIR4428-201ENST00000584884 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
MIR4428-201ENST00000584884 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
MIR4428-201ENST00000584884 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
MIR4428-201ENST00000584884 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
MIR4428-201ENST00000584884 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
MIR4428-201ENST00000584884 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.43
MIR4428-201ENST00000584884 POLA1P09884 1462 aaPredicted RBP12.35□□□□□ -0.43
MIR4428-201ENST00000584884 CUX1P39880 1505 aa12.35□□□□□ -0.43
MIR4428-201ENST00000584884 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
MIR4428-201ENST00000584884 SOGA1O94964 1423 aa12.34□□□□□ -0.43
MIR4428-201ENST00000584884 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
MIR4428-201ENST00000584884 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
MIR4428-201ENST00000584884 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
MIR4428-201ENST00000584884 TARBP1Q13395 1621 aaKnown RBP12.27□□□□□ -0.44
MIR4428-201ENST00000584884 FBLN2P98095 1184 aa12.27□□□□□ -0.45
MIR4428-201ENST00000584884 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
MIR4428-201ENST00000584884 EIF4G3O43432 1585 aaKnown RBP12.23□□□□□ -0.45
MIR4428-201ENST00000584884 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
MIR4428-201ENST00000584884 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
MIR4428-201ENST00000584884 SNAPC4Q5SXM2 1469 aa12.17□□□□□ -0.46
MIR4428-201ENST00000584884 CHMP7Q8WUX9 453 aaPredicted RBP12.17□□□□□ -0.46
MIR4428-201ENST00000584884 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
MIR4428-201ENST00000584884 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
MIR4428-201ENST00000584884 GAPVD1Q14C86 1478 aa12.15□□□□□ -0.46
MIR4428-201ENST00000584884 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
MIR4428-201ENST00000584884 MAGI1Q96QZ7 1491 aaPredicted RBP12.08□□□□□ -0.47
MIR4428-201ENST00000584884 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
MIR4428-201ENST00000584884 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
MIR4428-201ENST00000584884 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
MIR4428-201ENST00000584884 ABCA5Q8WWZ7 1642 aa12.06□□□□□ -0.48
MIR4428-201ENST00000584884 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
MIR4428-201ENST00000584884 CHD1O14646 1710 aa12.04□□□□□ -0.48
MIR4428-201ENST00000584884 ARHGEF11O15085 1522 aa12.04□□□□□ -0.48
MIR4428-201ENST00000584884 IGF1RP08069 1367 aa12.02□□□□□ -0.49
MIR4428-201ENST00000584884 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
MIR4428-201ENST00000584884 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
MIR4428-201ENST00000584884 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
MIR4428-201ENST00000584884 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
MIR4428-201ENST00000584884 GRIN2AQ12879 1464 aa12□□□□□ -0.49
MIR4428-201ENST00000584884 PBRM1Q86U86 1689 aa11.98□□□□□ -0.49
MIR4428-201ENST00000584884 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
MIR4428-201ENST00000584884 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
MIR4428-201ENST00000584884 ADAMTS12P58397 1594 aa11.97□□□□□ -0.49
MIR4428-201ENST00000584884 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.49
MIR4428-201ENST00000584884 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
MIR4428-201ENST00000584884 NUP160Q12769 1436 aa11.95□□□□□ -0.5
MIR4428-201ENST00000584884 RUSC2Q8N2Y8 1516 aa11.95□□□□□ -0.5
MIR4428-201ENST00000584884 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
MIR4428-201ENST00000584884 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
MIR4428-201ENST00000584884 ERCC6L2Q5T890 1561 aa11.9□□□□□ -0.5
MIR4428-201ENST00000584884 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
MIR4428-201ENST00000584884 PRG4Q92954 1404 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms