RNA–Protein interactions for RNA: ENST00000600220.5

ZNF544-217, Transcript of zinc finger protein 544, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene ZNF544, Length 2,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-217ENST00000600220 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
ZNF544-217ENST00000600220 CCDC180Q9P1Z9 1646 aa14.73□□□□□ -0.05
ZNF544-217ENST00000600220 ZCCHC6Q5VYS8 1495 aaKnown RBP14.16□□□□□ -0.14
ZNF544-217ENST00000600220 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
ZNF544-217ENST00000600220 MYO15BQ96JP2 1530 aa13.83□□□□□ -0.19
ZNF544-217ENST00000600220 ABCC9O60706 1549 aa13.7□□□□□ -0.22
ZNF544-217ENST00000600220 NACADO15069 1562 aa13.67□□□□□ -0.22
ZNF544-217ENST00000600220 DCAF8L2P0C7V8 631 aa13.62□□□□□ -0.23
ZNF544-217ENST00000600220 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
ZNF544-217ENST00000600220 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
ZNF544-217ENST00000600220 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
ZNF544-217ENST00000600220 UNC13AQ9UPW8 1703 aa13.24□□□□□ -0.29
ZNF544-217ENST00000600220 HRCP23327 699 aa13.21□□□□□ -0.29
ZNF544-217ENST00000600220 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
ZNF544-217ENST00000600220 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.31
ZNF544-217ENST00000600220 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
ZNF544-217ENST00000600220 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
ZNF544-217ENST00000600220 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.32
ZNF544-217ENST00000600220 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
ZNF544-217ENST00000600220 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
ZNF544-217ENST00000600220 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
ZNF544-217ENST00000600220 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
ZNF544-217ENST00000600220 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
ZNF544-217ENST00000600220 WIZO95785 1651 aa12.85□□□□□ -0.35
ZNF544-217ENST00000600220 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
ZNF544-217ENST00000600220 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
ZNF544-217ENST00000600220 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.36
ZNF544-217ENST00000600220 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
ZNF544-217ENST00000600220 SMARCA2P51531 1590 aa12.71□□□□□ -0.37
ZNF544-217ENST00000600220 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
ZNF544-217ENST00000600220 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
ZNF544-217ENST00000600220 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
ZNF544-217ENST00000600220 LOC105371045A0A1W2PR82 267 aa12.6□□□□□ -0.39
ZNF544-217ENST00000600220 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
ZNF544-217ENST00000600220 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
ZNF544-217ENST00000600220 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
ZNF544-217ENST00000600220 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
ZNF544-217ENST00000600220 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
ZNF544-217ENST00000600220 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
ZNF544-217ENST00000600220 ZEB1P37275 1124 aaPredicted RBP12.36□□□□□ -0.43
ZNF544-217ENST00000600220 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
ZNF544-217ENST00000600220 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
ZNF544-217ENST00000600220 CFTRP13569 1480 aa12.31□□□□□ -0.44
ZNF544-217ENST00000600220 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
ZNF544-217ENST00000600220 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.459e-6■■■■■ 50.1
ZNF544-217ENST00000600220 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
ZNF544-217ENST00000600220 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
ZNF544-217ENST00000600220 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
ZNF544-217ENST00000600220 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
ZNF544-217ENST00000600220 SYNJ1O43426 1573 aa12.21□□□□□ -0.45
ZNF544-217ENST00000600220 MYT1Q01538 1121 aa12.2□□□□□ -0.46
ZNF544-217ENST00000600220 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
ZNF544-217ENST00000600220 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
ZNF544-217ENST00000600220 GTF3C3Q9Y5Q9 886 aa12.19□□□□□ -0.46
ZNF544-217ENST00000600220 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
ZNF544-217ENST00000600220 EEA1Q15075 1411 aa12.17□□□□□ -0.46
ZNF544-217ENST00000600220 FAM9AQ8IZU1 332 aaPredicted RBP12.15□□□□□ -0.47
ZNF544-217ENST00000600220 CUX1P39880 1505 aa12.13□□□□□ -0.47
ZNF544-217ENST00000600220 FANCD2Q9BXW9 1451 aa12.09□□□□□ -0.47
ZNF544-217ENST00000600220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
ZNF544-217ENST00000600220 SOGA1O94964 1423 aa12.07□□□□□ -0.48
ZNF544-217ENST00000600220 CENPBP07199 599 aaPredicted RBP12.06□□□□□ -0.48
ZNF544-217ENST00000600220 NESP48681 1621 aa12.05□□□□□ -0.48
ZNF544-217ENST00000600220 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
ZNF544-217ENST00000600220 DIEXFQ68CQ4 756 aaKnown RBP12.03□□□□□ -0.48
ZNF544-217ENST00000600220 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
ZNF544-217ENST00000600220 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
ZNF544-217ENST00000600220 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.49
ZNF544-217ENST00000600220 KIF21BO75037 1637 aa12.01□□□□□ -0.49
ZNF544-217ENST00000600220 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
ZNF544-217ENST00000600220 DNAJC5BQ9UF47 199 aa12□□□□□ -0.49
ZNF544-217ENST00000600220 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
ZNF544-217ENST00000600220 TOPBP1Q92547 1522 aa11.98□□□□□ -0.49
ZNF544-217ENST00000600220 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
ZNF544-217ENST00000600220 FGD5Q6ZNL6 1462 aa11.97□□□□□ -0.49
ZNF544-217ENST00000600220 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
ZNF544-217ENST00000600220 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
ZNF544-217ENST00000600220 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
ZNF544-217ENST00000600220 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
ZNF544-217ENST00000600220 ERICH3Q5RHP9 1530 aa11.93□□□□□ -0.5
ZNF544-217ENST00000600220 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
ZNF544-217ENST00000600220 POLA1P09884 1462 aaPredicted RBP11.91□□□□□ -0.5
ZNF544-217ENST00000600220 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
ZNF544-217ENST00000600220 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
ZNF544-217ENST00000600220 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
ZNF544-217ENST00000600220 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
ZNF544-217ENST00000600220 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
ZNF544-217ENST00000600220 CUX2O14529 1486 aa11.88□□□□□ -0.51
ZNF544-217ENST00000600220 WDR62O43379 1518 aa11.85□□□□□ -0.51
ZNF544-217ENST00000600220 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
ZNF544-217ENST00000600220 TARBP1Q13395 1621 aaKnown RBP11.83□□□□□ -0.52
ZNF544-217ENST00000600220 ABCA5Q8WWZ7 1642 aa11.83□□□□□ -0.52
ZNF544-217ENST00000600220 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
ZNF544-217ENST00000600220 CEP162Q5TB80 1403 aa11.83□□□□□ -0.52
ZNF544-217ENST00000600220 IGF1RP08069 1367 aa11.82□□□□□ -0.52
ZNF544-217ENST00000600220 CUL7Q14999 1698 aa11.81□□□□□ -0.52
ZNF544-217ENST00000600220 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
ZNF544-217ENST00000600220 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
ZNF544-217ENST00000600220 ERCC6Q03468 1493 aa11.75□□□□□ -0.53
ZNF544-217ENST00000600220 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms