RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
TTC39C-204ENST00000577185 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
TTC39C-204ENST00000577185 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
TTC39C-204ENST00000577185 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
TTC39C-204ENST00000577185 POTEDQ86YR6 584 aa21.98■■□□□ 1.11
TTC39C-204ENST00000577185 FOXD1Q16676 465 aa21.96■■□□□ 1.11
TTC39C-204ENST00000577185 MSH5O43196 834 aa20.91■□□□□ 0.94
TTC39C-204ENST00000577185 PIAS4Q8N2W9 510 aaPredicted RBP20.29■□□□□ 0.84
TTC39C-204ENST00000577185 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
TTC39C-204ENST00000577185 ADRA2BP18089 450 aa19.69■□□□□ 0.74
TTC39C-204ENST00000577185 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
TTC39C-204ENST00000577185 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
TTC39C-204ENST00000577185 DMRT2Q9Y5R5 561 aa18.44■□□□□ 0.54
TTC39C-204ENST00000577185 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
TTC39C-204ENST00000577185 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
TTC39C-204ENST00000577185 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
TTC39C-204ENST00000577185 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
TTC39C-204ENST00000577185 C1QBPQ07021 282 aaKnown RBP17.45■□□□□ 0.38
TTC39C-204ENST00000577185 HOXD11P31277 338 aaPredicted RBP17.41■□□□□ 0.38
TTC39C-204ENST00000577185 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
TTC39C-204ENST00000577185 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
TTC39C-204ENST00000577185 POTEHQ6S545 545 aa17.04■□□□□ 0.32
TTC39C-204ENST00000577185 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
TTC39C-204ENST00000577185 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
TTC39C-204ENST00000577185 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
TTC39C-204ENST00000577185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
TTC39C-204ENST00000577185 DSG3P32926 999 aa16.32■□□□□ 0.2
TTC39C-204ENST00000577185 CAPN15O75808 1086 aa16.18■□□□□ 0.18
TTC39C-204ENST00000577185 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
TTC39C-204ENST00000577185 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
TTC39C-204ENST00000577185 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
TTC39C-204ENST00000577185 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
TTC39C-204ENST00000577185 ABCB7O75027 752 aa15.72■□□□□ 0.11
TTC39C-204ENST00000577185 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
TTC39C-204ENST00000577185 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
TTC39C-204ENST00000577185 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
TTC39C-204ENST00000577185 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
TTC39C-204ENST00000577185 APLP2Q06481 763 aa15.58■□□□□ 0.08
TTC39C-204ENST00000577185 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
TTC39C-204ENST00000577185 ABCC9O60706 1549 aa15.5■□□□□ 0.07
TTC39C-204ENST00000577185 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
TTC39C-204ENST00000577185 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
TTC39C-204ENST00000577185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
TTC39C-204ENST00000577185 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
TTC39C-204ENST00000577185 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
TTC39C-204ENST00000577185 POLA2Q14181 598 aa15.07■□□□□ 0
TTC39C-204ENST00000577185 PIP4P2Q8N4L2 257 aa15.04■□□□□ -0
TTC39C-204ENST00000577185 AKT1S1Q96B36 256 aa15.04■□□□□ -0
TTC39C-204ENST00000577185 HAX1O00165 279 aa15.02■□□□□ -0
TTC39C-204ENST00000577185 REM2Q8IYK8 340 aaPredicted RBP14.9□□□□□ -0.02
TTC39C-204ENST00000577185 FXR2P51116 673 aaKnown RBP eCLIP14.82□□□□□ -0.04
TTC39C-204ENST00000577185 EVX2Q03828 476 aa14.77□□□□□ -0.05
TTC39C-204ENST00000577185 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
TTC39C-204ENST00000577185 KCNA4P22459 653 aa14.74□□□□□ -0.05
TTC39C-204ENST00000577185 RB1CC1Q8TDY2 1594 aa14.7□□□□□ -0.06
TTC39C-204ENST00000577185 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
TTC39C-204ENST00000577185 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
TTC39C-204ENST00000577185 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
TTC39C-204ENST00000577185 NACADO15069 1562 aa14.59□□□□□ -0.07
TTC39C-204ENST00000577185 DCAF8L2P0C7V8 631 aa14.56□□□□□ -0.08
TTC39C-204ENST00000577185 LHX8Q68G74 356 aa14.56□□□□□ -0.08
TTC39C-204ENST00000577185 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
TTC39C-204ENST00000577185 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
TTC39C-204ENST00000577185 GABBR2O75899 941 aa14.39□□□□□ -0.11
TTC39C-204ENST00000577185 PLSCR2Q9NRY7 297 aa14.39□□□□□ -0.11
TTC39C-204ENST00000577185 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
TTC39C-204ENST00000577185 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
TTC39C-204ENST00000577185 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
TTC39C-204ENST00000577185 UNC13AQ9UPW8 1703 aa14.25□□□□□ -0.13
TTC39C-204ENST00000577185 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
TTC39C-204ENST00000577185 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
TTC39C-204ENST00000577185 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
TTC39C-204ENST00000577185 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
TTC39C-204ENST00000577185 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
TTC39C-204ENST00000577185 ZCCHC6Q5VYS8 1495 aaKnown RBP14.16□□□□□ -0.14
TTC39C-204ENST00000577185 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
TTC39C-204ENST00000577185 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
TTC39C-204ENST00000577185 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
TTC39C-204ENST00000577185 POTEIP0CG38 1075 aa14.08□□□□□ -0.16
TTC39C-204ENST00000577185 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
TTC39C-204ENST00000577185 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
TTC39C-204ENST00000577185 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
TTC39C-204ENST00000577185 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
TTC39C-204ENST00000577185 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
TTC39C-204ENST00000577185 FBLN2P98095 1184 aa13.94□□□□□ -0.18
TTC39C-204ENST00000577185 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
TTC39C-204ENST00000577185 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
TTC39C-204ENST00000577185 CLCN6P51797 869 aa13.86□□□□□ -0.19
TTC39C-204ENST00000577185 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
TTC39C-204ENST00000577185 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
TTC39C-204ENST00000577185 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
TTC39C-204ENST00000577185 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
TTC39C-204ENST00000577185 POTEMA6NI47 508 aa13.76□□□□□ -0.21
TTC39C-204ENST00000577185 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
TTC39C-204ENST00000577185 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
TTC39C-204ENST00000577185 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
TTC39C-204ENST00000577185 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
TTC39C-204ENST00000577185 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
TTC39C-204ENST00000577185 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
TTC39C-204ENST00000577185 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms