RNA–Protein interactions for RNA: ENST00000427531.6

ESR1-206, Transcript of estrogen receptor 1, humanhuman

TSL 1 (best) BASIC

Gene ESR1, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-206ENST00000427531 MYT1Q01538 1121 aa15.49■□□□□ 0.07
ESR1-206ENST00000427531 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
ESR1-206ENST00000427531 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
ESR1-206ENST00000427531 CCER1Q8TC90 406 aaPredicted RBP14.63□□□□□ -0.07
ESR1-206ENST00000427531 ERICH6Q7L0X2 663 aa14.58□□□□□ -0.08
ESR1-206ENST00000427531 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
ESR1-206ENST00000427531 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
ESR1-206ENST00000427531 CENPBP07199 599 aaPredicted RBP14.36□□□□□ -0.11
ESR1-206ENST00000427531 YTHDC1Q96MU7 727 aaKnown RBP14.29□□□□□ -0.12
ESR1-206ENST00000427531 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
ESR1-206ENST00000427531 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
ESR1-206ENST00000427531 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
ESR1-206ENST00000427531 PCGF6Q9BYE7 350 aa14.05□□□□□ -0.16
ESR1-206ENST00000427531 ZEB1P37275 1124 aaPredicted RBP14.03□□□□□ -0.16
ESR1-206ENST00000427531 NEFLP07196 543 aa13.89□□□□□ -0.19
ESR1-206ENST00000427531 HRCP23327 699 aa13.82□□□□□ -0.2
ESR1-206ENST00000427531 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
ESR1-206ENST00000427531 DAXXQ9UER7 740 aaPredicted RBP13.66□□□□□ -0.22
ESR1-206ENST00000427531 APLP2Q06481 763 aa13.6□□□□□ -0.23
ESR1-206ENST00000427531 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
ESR1-206ENST00000427531 GLIPR1L2Q4G1C9 344 aa13.51□□□□□ -0.25
ESR1-206ENST00000427531 TRIM26Q12899 539 aaPredicted RBP13.48□□□□□ -0.25
ESR1-206ENST00000427531 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
ESR1-206ENST00000427531 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
ESR1-206ENST00000427531 PRKCSHP14314 528 aaPredicted RBP13.37□□□□□ -0.27
ESR1-206ENST00000427531 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
ESR1-206ENST00000427531 CHIC1Q5VXU3 224 aa13.29□□□□□ -0.28
ESR1-206ENST00000427531 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
ESR1-206ENST00000427531 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
ESR1-206ENST00000427531 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
ESR1-206ENST00000427531 CCDC180Q9P1Z9 1646 aa13.09□□□□□ -0.31
ESR1-206ENST00000427531 ZCCHC6Q5VYS8 1495 aaKnown RBP13.06□□□□□ -0.32
ESR1-206ENST00000427531 DIEXFQ68CQ4 756 aaKnown RBP13.06□□□□□ -0.32
ESR1-206ENST00000427531 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
ESR1-206ENST00000427531 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
ESR1-206ENST00000427531 EIF5BO60841 1220 aaKnown RBP13.05□□□□□ -0.32
ESR1-206ENST00000427531 RANGAP1P46060 587 aaPredicted RBP13.02□□□□□ -0.32
ESR1-206ENST00000427531 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
ESR1-206ENST00000427531 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.33
ESR1-206ENST00000427531 CDK11AQ9UQ88 783 aaPredicted RBP12.96□□□□□ -0.33
ESR1-206ENST00000427531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
ESR1-206ENST00000427531 ANP32BQ92688 251 aaKnown RBP12.88□□□□□ -0.35
ESR1-206ENST00000427531 BCL11AQ9H165 835 aa12.86□□□□□ -0.35
ESR1-206ENST00000427531 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
ESR1-206ENST00000427531 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
ESR1-206ENST00000427531 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
ESR1-206ENST00000427531 DCAF1Q9Y4B6 1507 aa12.83□□□□□ -0.36
ESR1-206ENST00000427531 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
ESR1-206ENST00000427531 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
ESR1-206ENST00000427531 NCLP19338 710 aaKnown RBP12.68□□□□□ -0.38
ESR1-206ENST00000427531 TRIM44Q96DX7 344 aaPredicted RBP12.67□□□□□ -0.38
ESR1-206ENST00000427531 BCANQ96GW7 911 aa12.63□□□□□ -0.39
ESR1-206ENST00000427531 ATP1B4Q9UN42 357 aaPredicted RBP12.62□□□□□ -0.39
ESR1-206ENST00000427531 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
ESR1-206ENST00000427531 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
ESR1-206ENST00000427531 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
ESR1-206ENST00000427531 ITGAEP38570 1179 aa12.56□□□□□ -0.4
ESR1-206ENST00000427531 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
ESR1-206ENST00000427531 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
ESR1-206ENST00000427531 ANP32CO43423 234 aa12.46□□□□□ -0.41
ESR1-206ENST00000427531 UPF2Q9HAU5 1272 aaKnown RBP12.45□□□□□ -0.42
ESR1-206ENST00000427531 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
ESR1-206ENST00000427531 SCRIBQ14160 1630 aa12.38□□□□□ -0.43
ESR1-206ENST00000427531 FKBP8Q14318 412 aa12.38□□□□□ -0.43
ESR1-206ENST00000427531 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
ESR1-206ENST00000427531 ABCC9O60706 1549 aa12.36□□□□□ -0.43
ESR1-206ENST00000427531 MIER1Q8N108 512 aa12.36□□□□□ -0.43
ESR1-206ENST00000427531 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
ESR1-206ENST00000427531 NEFMP07197 916 aa12.34□□□□□ -0.43
ESR1-206ENST00000427531 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
ESR1-206ENST00000427531 NBR1Q14596 966 aa12.32□□□□□ -0.44
ESR1-206ENST00000427531 PODXL2Q9NZ53 605 aa12.32□□□□□ -0.44
ESR1-206ENST00000427531 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
ESR1-206ENST00000427531 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
ESR1-206ENST00000427531 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
ESR1-206ENST00000427531 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
ESR1-206ENST00000427531 PPM1GO15355 546 aaPredicted RBP12.28□□□□□ -0.44
ESR1-206ENST00000427531 NAP1L5Q96NT1 182 aaPredicted RBP12.27□□□□□ -0.44
ESR1-206ENST00000427531 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
ESR1-206ENST00000427531 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
ESR1-206ENST00000427531 FAM50AQ14320 339 aaKnown RBP12.26□□□□□ -0.45
ESR1-206ENST00000427531 PTMSP20962 102 aa12.22□□□□□ -0.45
ESR1-206ENST00000427531 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
ESR1-206ENST00000427531 GOLGA6L22H0YM25 854 aa12.21□□□□□ -0.45
ESR1-206ENST00000427531 BECN1Q14457 450 aa12.21□□□□□ -0.45
ESR1-206ENST00000427531 PLPPR3Q6T4P5 718 aa12.2□□□□□ -0.46
ESR1-206ENST00000427531 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
ESR1-206ENST00000427531 NACADO15069 1562 aa12.19□□□□□ -0.46
ESR1-206ENST00000427531 SUPT16HQ9Y5B9 1047 aaKnown RBP12.15□□□□□ -0.46
ESR1-206ENST00000427531 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
ESR1-206ENST00000427531 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
ESR1-206ENST00000427531 CALRP27797 417 aaKnown RBP12.13□□□□□ -0.47
ESR1-206ENST00000427531 TNNT3P45378 269 aaPredicted RBP12.13□□□□□ -0.47
ESR1-206ENST00000427531 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
ESR1-206ENST00000427531 PTMAP06454 111 aaKnown RBP12.12□□□□□ -0.47
ESR1-206ENST00000427531 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
ESR1-206ENST00000427531 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
ESR1-206ENST00000427531 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
ESR1-206ENST00000427531 L1TD1Q5T7N2 865 aaKnown RBP12.11□□□□□ -0.47
ESR1-206ENST00000427531 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms