Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 B9D1-210ENST00000477683 618 ntTSL 1 (best)9.88□□□□□ -0.831e-7■■□□□ 11.8
PRPF8Q6P2Q9 B9D1-214ENST00000575478 553 ntTSL 29.76□□□□□ -0.851e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-208ENST00000547988 1277 ntTSL 1 (best)9.61□□□□□ -0.871e-7■■□□□ 11.8
PRPF8Q6P2Q9 CSTF3-205ENST00000524775 434 ntTSL 49.51□□□□□ -0.891e-7■■□□□ 11.8
PRPF8Q6P2Q9 CCDC12-204ENST00000460035 572 ntTSL 29.27□□□□□ -0.921e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-209ENST00000548177 567 ntTSL 49.21□□□□□ -0.931e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-212ENST00000549173 554 ntTSL 48.66□□□□□ -1.021e-7■■□□□ 11.8
PRPF8Q6P2Q9 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.031e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-222ENST00000553154 566 ntTSL 28.43□□□□□ -1.061e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-216ENST00000549784 746 ntTSL 48.35□□□□□ -1.071e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-219ENST00000551900 559 ntTSL 48.25□□□□□ -1.091e-7■■□□□ 11.8
PRPF8Q6P2Q9 RPTOR-204ENST00000572733 424 ntTSL 38.1□□□□□ -1.111e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-213ENST00000549349 586 ntTSL 48.03□□□□□ -1.121e-7■■□□□ 11.8
PRPF8Q6P2Q9 PCCB-202ENST00000459873 534 ntTSL 47.73□□□□□ -1.171e-7■■□□□ 11.8
PRPF8Q6P2Q9 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC7.61□□□□□ -1.191e-7■■□□□ 11.8
PRPF8Q6P2Q9 EPS15L1-216ENST00000602151 420 ntTSL 27.13□□□□□ -1.271e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-205ENST00000546774 733 ntTSL 27.05□□□□□ -1.281e-7■■□□□ 11.8
PRPF8Q6P2Q9 MSH6-211ENST00000606499 833 ntTSL 36.32□□□□□ -1.41e-7■■□□□ 11.8
PRPF8Q6P2Q9 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC6.15□□□□□ -1.431e-7■■□□□ 11.8
PRPF8Q6P2Q9 ZNF644-210ENST00000495966 820 ntTSL 36.12□□□□□ -1.431e-7■■□□□ 11.8
PRPF8Q6P2Q9 CSTF3-207ENST00000526480 479 ntTSL 36.02□□□□□ -1.451e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-211ENST00000548431 612 ntTSL 25.91□□□□□ -1.461e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-215ENST00000549688 549 ntTSL 45.91□□□□□ -1.461e-7■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-206ENST00000547885 555 ntTSL 45.48□□□□□ -1.531e-7■■□□□ 11.8
PRPF8Q6P2Q9 MIR6820-201ENST00000611508 62 ntBASIC4.96□□□□□ -1.621e-7■■□□□ 11.8
PRPF8Q6P2Q9 ZBTB38-210ENST00000509883 2659 ntTSL 1 (best)4.8□□□□□ -1.641e-7■■□□□ 11.8
PRPF8Q6P2Q9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.661e-7■■□□□ 11.8
PRPF8Q6P2Q9 NDUFA9-204ENST00000535726 930 ntTSL 54.51□□□□□ -1.691e-7■■□□□ 11.8
PRPF8Q6P2Q9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.73e-8■■□□□ 11.8
PRPF8Q6P2Q9 CALCOCO1-221ENST00000552623 551 ntTSL 44.12□□□□□ -1.751e-7■■□□□ 11.8
PRPF8Q6P2Q9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.861e-7■■□□□ 11.8
PRPF8Q6P2Q9 DZIP3-203ENST00000479138 2076 ntTSL 22.67□□□□□ -1.981e-7■■□□□ 11.8
PRPF8Q6P2Q9 ZBTB38-218ENST00000513570 649 ntTSL 1 (best)2.25□□□□□ -2.051e-7■■□□□ 11.8
PRPF8Q6P2Q9 TMEM184A-211ENST00000474813 1008 ntTSL 318.31■□□□□ 0.522e-7■■□□□ 11.8
PRPF8Q6P2Q9 TMEM184A-202ENST00000319010 866 ntTSL 513.43□□□□□ -0.262e-7■■□□□ 11.8
PRPF8Q6P2Q9 TEAD4-204ENST00000443986 641 ntTSL 311.34□□□□□ -0.595e-7■■□□□ 11.8
PRPF8Q6P2Q9 C16orf58-208ENST00000567673 766 ntTSL 210.37□□□□□ -0.755e-7■■□□□ 11.8
PRPF8Q6P2Q9 ASGR1-206ENST00000573596 2083 ntTSL 514.5□□□□□ -0.092e-12■■□□□ 11.8
PRPF8Q6P2Q9 ASGR1-205ENST00000573083 855 ntTSL 38.28□□□□□ -1.082e-12■■□□□ 11.8
PRPF8Q6P2Q9 TNS3-202ENST00000413551 698 ntTSL 512.49□□□□□ -0.412e-6■■□□□ 11.8
PRPF8Q6P2Q9 MTMR4-206ENST00000582390 1281 ntTSL 520.18■□□□□ 0.821e-9■■□□□ 11.8
PRPF8Q6P2Q9 ANAPC2-206ENST00000493730 597 ntTSL 316.75■□□□□ 0.274e-6■■□□□ 11.8
PRPF8Q6P2Q9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.07■□□□□ 0.164e-6■■□□□ 11.8
PRPF8Q6P2Q9 ANAPC2-204ENST00000485970 341 ntTSL 215.46■□□□□ 0.074e-6■■□□□ 11.8
PRPF8Q6P2Q9 ANAPC2-205ENST00000487917 1972 ntTSL 215.32■□□□□ 0.044e-6■■□□□ 11.8
PRPF8Q6P2Q9 SLC13A3-209ENST00000468915 1597 ntTSL 512.29□□□□□ -0.444e-6■■□□□ 11.8
PRPF8Q6P2Q9 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.834e-6■■□□□ 11.8
PRPF8Q6P2Q9 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC9.33□□□□□ -0.924e-6■■□□□ 11.8
PRPF8Q6P2Q9 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC8.09□□□□□ -1.114e-6■■□□□ 11.8
PRPF8Q6P2Q9 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC6.66□□□□□ -1.344e-6■■□□□ 11.8
PRPF8Q6P2Q9 EIF3G-210ENST00000590158 1034 ntTSL 213.07□□□□□ -0.328e-9■■□□□ 11.8
PRPF8Q6P2Q9 EIF3G-213ENST00000593054 453 ntTSL 59.62□□□□□ -0.878e-9■■□□□ 11.8
PRPF8Q6P2Q9 NDE1-210ENST00000574163 352 ntTSL 38.41□□□□□ -1.061e-6■■□□□ 11.8
PRPF8Q6P2Q9 RELA-221ENST00000533187 456 ntTSL 316.4■□□□□ 0.228e-7■■□□□ 11.8
PRPF8Q6P2Q9 RELA-203ENST00000525301 623 ntTSL 311.32□□□□□ -0.68e-7■■□□□ 11.8
PRPF8Q6P2Q9 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.81e-10■■□□□ 11.8
PRPF8Q6P2Q9 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.441e-10■■□□□ 11.8
PRPF8Q6P2Q9 DHPS-209ENST00000595844 909 ntTSL 211.76□□□□□ -0.535e-7■■□□□ 11.8
PRPF8Q6P2Q9 ARHGEF7-219ENST00000544132 766 ntTSL 211.54□□□□□ -0.564e-8■■□□□ 11.8
PRPF8Q6P2Q9 SRSF1-202ENST00000578430 689 ntTSL 210.87□□□□□ -0.671e-11■■□□□ 11.8
PRPF8Q6P2Q9 TRA2B-208ENST00000465245 634 ntTSL 310.8□□□□□ -0.683e-12■■□□□ 11.8
PRPF8Q6P2Q9 TRA2B-213ENST00000485530 839 ntTSL 210.13□□□□□ -0.793e-12■■□□□ 11.8
PRPF8Q6P2Q9 STXBP2-212ENST00000597467 821 ntTSL 319.12■□□□□ 0.652e-7■■□□□ 11.8
PRPF8Q6P2Q9 STXBP2-218ENST00000599905 589 ntTSL 417.68■□□□□ 0.422e-7■■□□□ 11.8
PRPF8Q6P2Q9 STXBP2-204ENST00000593535 549 ntTSL 411.26□□□□□ -0.612e-7■■□□□ 11.8
PRPF8Q6P2Q9 STXBP2-207ENST00000595181 632 ntTSL 29.9□□□□□ -0.822e-7■■□□□ 11.8
PRPF8Q6P2Q9 ALAD-203ENST00000448137 536 ntTSL 416.46■□□□□ 0.239e-7■■□□□ 11.8
PRPF8Q6P2Q9 TOP3B-217ENST00000489581 789 ntTSL 215.11■□□□□ 0.011e-12■■□□□ 11.8
PRPF8Q6P2Q9 ALAD-205ENST00000464749 563 ntTSL 414.38□□□□□ -0.119e-7■■□□□ 11.8
PRPF8Q6P2Q9 ALAD-206ENST00000468504 851 ntTSL 511.73□□□□□ -0.539e-7■■□□□ 11.8
PRPF8Q6P2Q9 CFB-277ENST00000467360 1082 ntTSL 56.59□□□□□ -1.363e-10■■□□□ 11.8
PRPF8Q6P2Q9 SLC22A18-210ENST00000492567 684 ntTSL 216.75■□□□□ 0.272e-6■■□□□ 11.8
PRPF8Q6P2Q9 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.88e-7■■□□□ 11.8
PRPF8Q6P2Q9 BAG6-256ENST00000462682 349 ntTSL 29.82□□□□□ -0.844e-8■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-217ENST00000530650 2094 ntTSL 1 (best)17.48■□□□□ 0.396e-7■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-216ENST00000529601 1671 ntTSL 217.02■□□□□ 0.316e-7■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.316e-7■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.83■□□□□ 0.296e-7■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-214ENST00000529292 1305 ntTSL 516.57■□□□□ 0.246e-7■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-221ENST00000531321 945 ntTSL 316.55■□□□□ 0.246e-7■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-208ENST00000526809 829 ntTSL 516.33■□□□□ 0.26e-7■■□□□ 11.8
PRPF8Q6P2Q9 TM7SF2-213ENST00000529233 756 ntTSL 315.83■□□□□ 0.126e-7■■□□□ 11.8
PRPF8Q6P2Q9 ADAM10-216ENST00000561149 529 ntTSL 413.68□□□□□ -0.229e-8■■□□□ 11.8
PRPF8Q6P2Q9 DPH2-216ENST00000534655 558 ntTSL 213.58□□□□□ -0.249e-8■■□□□ 11.8
PRPF8Q6P2Q9 DPH2-203ENST00000459879 1013 ntTSL 211.77□□□□□ -0.539e-8■■□□□ 11.8
PRPF8Q6P2Q9 FBXO44-208ENST00000471895 769 ntTSL 39.3□□□□□ -0.922e-39■■□□□ 11.8
PRPF8Q6P2Q9 SCARNA5-201ENST00000516201 276 ntBASIC5.63□□□□□ -1.514e-40■■□□□ 11.8
PRPF8Q6P2Q9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.89□□□□□ -0.196e-12■■□□□ 11.8
PRPF8Q6P2Q9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.416e-12■■□□□ 11.8
PRPF8Q6P2Q9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.4□□□□□ -0.426e-12■■□□□ 11.8
PRPF8Q6P2Q9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.526e-12■■□□□ 11.8
PRPF8Q6P2Q9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.536e-12■■□□□ 11.8
PRPF8Q6P2Q9 MBD4-208ENST00000509828 576 ntTSL 29.11□□□□□ -0.956e-12■■□□□ 11.8
PRPF8Q6P2Q9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.95■□□□□ 0.144e-7■■□□□ 11.8
PRPF8Q6P2Q9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.02■□□□□ 0.154e-17■■□□□ 11.8
PRPF8Q6P2Q9 IPO9-202ENST00000456707 609 ntTSL 37.67□□□□□ -1.183e-8■■□□□ 11.8
PRPF8Q6P2Q9 GATAD2A-210ENST00000457895 729 ntTSL 218.41■□□□□ 0.541e-6■■□□□ 11.8
PRPF8Q6P2Q9 GATAD2A-207ENST00000432704 570 ntTSL 415.18■□□□□ 0.021e-6■■□□□ 11.8
PRPF8Q6P2Q9 GATAD2A-206ENST00000429242 504 ntTSL 39.66□□□□□ -0.861e-6■■□□□ 11.8
PRPF8Q6P2Q9 HDAC10-218ENST00000496909 732 ntTSL 316■□□□□ 0.154e-7■■□□□ 11.7
Retrieved 100 of 73,762 protein–RNA pairs in 999.2 ms