RNA–Protein interactions for RNA: ENST00000360538.6

TOPORS-201, Transcript of TOP1 binding arginine/serine rich protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOPORS, Length 4,098 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPORS-201ENST00000360538 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
TOPORS-201ENST00000360538 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
TOPORS-201ENST00000360538 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
TOPORS-201ENST00000360538 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
TOPORS-201ENST00000360538 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
TOPORS-201ENST00000360538 ABCC9O60706 1549 aa18.99■□□□□ 0.63
TOPORS-201ENST00000360538 FAM9AQ8IZU1 332 aaPredicted RBP18.85■□□□□ 0.61
TOPORS-201ENST00000360538 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
TOPORS-201ENST00000360538 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
TOPORS-201ENST00000360538 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
TOPORS-201ENST00000360538 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
TOPORS-201ENST00000360538 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
TOPORS-201ENST00000360538 TTBK1Q5TCY1 1321 aaPredicted RBP18.3■□□□□ 0.52
TOPORS-201ENST00000360538 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
TOPORS-201ENST00000360538 PCGF6Q9BYE7 350 aa18.29■□□□□ 0.52
TOPORS-201ENST00000360538 LOC105371045A0A1W2PR82 267 aa18.23■□□□□ 0.51
TOPORS-201ENST00000360538 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
TOPORS-201ENST00000360538 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
TOPORS-201ENST00000360538 APLP2Q06481 763 aa18.19■□□□□ 0.5
TOPORS-201ENST00000360538 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
TOPORS-201ENST00000360538 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
TOPORS-201ENST00000360538 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
TOPORS-201ENST00000360538 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
TOPORS-201ENST00000360538 NACADO15069 1562 aa17.85■□□□□ 0.45
TOPORS-201ENST00000360538 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
TOPORS-201ENST00000360538 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
TOPORS-201ENST00000360538 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
TOPORS-201ENST00000360538 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
TOPORS-201ENST00000360538 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.39
TOPORS-201ENST00000360538 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
TOPORS-201ENST00000360538 ITGAEP38570 1179 aa17.46■□□□□ 0.39
TOPORS-201ENST00000360538 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
TOPORS-201ENST00000360538 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
TOPORS-201ENST00000360538 HRCP23327 699 aa17.41■□□□□ 0.38
TOPORS-201ENST00000360538 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
TOPORS-201ENST00000360538 BAZ1AQ9NRL2 1556 aaPredicted RBP17.39■□□□□ 0.37
TOPORS-201ENST00000360538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.38■□□□□ 0.37
TOPORS-201ENST00000360538 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
TOPORS-201ENST00000360538 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
TOPORS-201ENST00000360538 FBLN2P98095 1184 aa17.24■□□□□ 0.35
TOPORS-201ENST00000360538 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
TOPORS-201ENST00000360538 WIZO95785 1651 aa17.13■□□□□ 0.33
TOPORS-201ENST00000360538 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
TOPORS-201ENST00000360538 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
TOPORS-201ENST00000360538 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
TOPORS-201ENST00000360538 SOGA1O94964 1423 aa16.97■□□□□ 0.31
TOPORS-201ENST00000360538 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
TOPORS-201ENST00000360538 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
TOPORS-201ENST00000360538 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
TOPORS-201ENST00000360538 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
TOPORS-201ENST00000360538 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
TOPORS-201ENST00000360538 EEA1Q15075 1411 aa16.95■□□□□ 0.3
TOPORS-201ENST00000360538 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
TOPORS-201ENST00000360538 CLIP1P30622 1438 aa16.92■□□□□ 0.3
TOPORS-201ENST00000360538 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
TOPORS-201ENST00000360538 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
TOPORS-201ENST00000360538 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
TOPORS-201ENST00000360538 KIF27Q86VH2 1401 aa16.86■□□□□ 0.29
TOPORS-201ENST00000360538 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
TOPORS-201ENST00000360538 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
TOPORS-201ENST00000360538 TNIKQ9UKE5 1360 aa16.82■□□□□ 0.28
TOPORS-201ENST00000360538 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
TOPORS-201ENST00000360538 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
TOPORS-201ENST00000360538 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
TOPORS-201ENST00000360538 CUX2O14529 1486 aa16.74■□□□□ 0.27
TOPORS-201ENST00000360538 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
TOPORS-201ENST00000360538 POLR3GLQ9BT43 218 aa16.73■□□□□ 0.27
TOPORS-201ENST00000360538 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
TOPORS-201ENST00000360538 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
TOPORS-201ENST00000360538 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
TOPORS-201ENST00000360538 CARMIL1Q5VZK9 1371 aa16.68■□□□□ 0.26
TOPORS-201ENST00000360538 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
TOPORS-201ENST00000360538 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
TOPORS-201ENST00000360538 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
TOPORS-201ENST00000360538 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
TOPORS-201ENST00000360538 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
TOPORS-201ENST00000360538 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
TOPORS-201ENST00000360538 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
TOPORS-201ENST00000360538 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
TOPORS-201ENST00000360538 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
TOPORS-201ENST00000360538 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
TOPORS-201ENST00000360538 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
TOPORS-201ENST00000360538 ZNF326Q5BKZ1 582 aaKnown RBP16.56■□□□□ 0.24
TOPORS-201ENST00000360538 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
TOPORS-201ENST00000360538 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
TOPORS-201ENST00000360538 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
TOPORS-201ENST00000360538 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.23
TOPORS-201ENST00000360538 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
TOPORS-201ENST00000360538 RRP7BPQ9NSQ0 103 aa16.43■□□□□ 0.22
TOPORS-201ENST00000360538 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
TOPORS-201ENST00000360538 PLEKHD1A6NEE1 506 aa16.4■□□□□ 0.22
TOPORS-201ENST00000360538 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
TOPORS-201ENST00000360538 NEFLP07196 543 aa16.39■□□□□ 0.21
TOPORS-201ENST00000360538 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
TOPORS-201ENST00000360538 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
TOPORS-201ENST00000360538 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
TOPORS-201ENST00000360538 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
TOPORS-201ENST00000360538 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
TOPORS-201ENST00000360538 CFTRP13569 1480 aa16.35■□□□□ 0.21
TOPORS-201ENST00000360538 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms