Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC29.76■■■□□ 2.36
SCAF1Q9H7N4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC29.76■■■□□ 2.36
SCAF1Q9H7N4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.36
SCAF1Q9H7N4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SCAF1Q9H7N4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 FXN-202ENST00000396364 980 ntTSL 5 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC29.75■■■□□ 2.35
SCAF1Q9H7N4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 MIR4785-201ENST00000585005 73 ntBASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 AC069544.1-201ENST00000609399 999 ntBASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC29.74■■■□□ 2.35
SCAF1Q9H7N4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 NME6-213ENST00000451657 871 ntTSL 2 BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 HLA-B-256ENST00000639848 1089 ntBASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 AC244015.2-201ENST00000616358 1861 ntBASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SCAF1Q9H7N4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 AC006213.4-201ENST00000616184 634 ntBASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 AL049637.2-201ENST00000641778 930 ntBASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC29.72■■■□□ 2.35
SCAF1Q9H7N4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 AL591742.1-201ENST00000604433 565 ntBASIC29.71■■■□□ 2.35
SCAF1Q9H7N4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC29.7■■■□□ 2.35
SCAF1Q9H7N4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC29.7■■■□□ 2.35
SCAF1Q9H7N4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
SCAF1Q9H7N4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms