Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL121603.2-201ENST00000557373 2117 ntBASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 H19-201ENST00000411754 1788 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 NIFKP9-201ENST00000419265 221 ntBASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 NAPSB-206ENST00000562112 1266 ntBASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC006011.2-201ENST00000621313 1158 ntBASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL024507.2-201ENST00000606070 2574 ntBASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP4-1Q9BYQ7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL137013.1-201ENST00000432946 1228 ntBASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 ABBA01031674.1-201ENST00000635145 728 ntBASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 Z98882.1-201ENST00000622160 2253 ntBASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
KRTAP4-1Q9BYQ7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 KSR1P1-201ENST00000446298 240 ntBASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC004264.1-201ENST00000608354 794 ntBASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 KRT18P22-201ENST00000402024 1347 ntBASIC10.46□□□□□ -0.73
KRTAP4-1Q9BYQ7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms