Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF217Q8TC41 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF217Q8TC41 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF217Q8TC41 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 AC055733.4-201ENST00000638462 1354 ntBASIC19.2■□□□□ 0.66
RNF217Q8TC41 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 AL031432.3-201ENST00000607698 485 ntBASIC19.2■□□□□ 0.66
RNF217Q8TC41 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF217Q8TC41 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF217Q8TC41 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 TNXA-203ENST00000507684 2038 ntBASIC19.19■□□□□ 0.66
RNF217Q8TC41 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF217Q8TC41 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF217Q8TC41 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.18■□□□□ 0.66
RNF217Q8TC41 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.18■□□□□ 0.66
RNF217Q8TC41 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 SUDS3P1-201ENST00000505831 966 ntBASIC19.18■□□□□ 0.66
RNF217Q8TC41 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF217Q8TC41 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF217Q8TC41 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF217Q8TC41 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF217Q8TC41 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF217Q8TC41 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms