Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 PBX2P1-201ENST00000493219 1291 ntBASIC19.44■□□□□ 0.7
HIPK4Q8NE63 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 AC011484.1-201ENST00000377652 1995 ntBASIC19.44■□□□□ 0.7
HIPK4Q8NE63 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.44■□□□□ 0.7
HIPK4Q8NE63 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 MIR572-201ENST00000384983 95 ntBASIC19.43■□□□□ 0.7
HIPK4Q8NE63 AC096631.2-201ENST00000436136 790 ntBASIC19.43■□□□□ 0.7
HIPK4Q8NE63 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 AC008406.3-201ENST00000620001 1374 ntBASIC19.43■□□□□ 0.7
HIPK4Q8NE63 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.43■□□□□ 0.7
HIPK4Q8NE63 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIPK4Q8NE63 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 EDA-201ENST00000338901 1233 ntBASIC19.42■□□□□ 0.7
HIPK4Q8NE63 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 AP001330.3-201ENST00000520123 633 ntBASIC19.42■□□□□ 0.7
HIPK4Q8NE63 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 AC106739.1-201ENST00000617035 715 ntBASIC19.42■□□□□ 0.7
HIPK4Q8NE63 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 AC005332.7-201ENST00000614046 2005 ntBASIC19.42■□□□□ 0.7
HIPK4Q8NE63 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIPK4Q8NE63 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIPK4Q8NE63 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIPK4Q8NE63 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms