Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 AC073210.2-201ENST00000430369 194 ntBASIC18.78■□□□□ 0.6
CCDC71Q8IV32 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 MKRN4P-201ENST00000444706 1521 ntBASIC18.78■□□□□ 0.6
CCDC71Q8IV32 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC71Q8IV32 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 AC018445.3-201ENST00000624177 1945 ntBASIC18.77■□□□□ 0.6
CCDC71Q8IV32 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 MIPEPP3-201ENST00000412105 444 ntBASIC18.77■□□□□ 0.6
CCDC71Q8IV32 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 MIR4758-201ENST00000577688 71 ntBASIC18.77■□□□□ 0.6
CCDC71Q8IV32 AC016405.3-201ENST00000607710 860 ntBASIC18.77■□□□□ 0.6
CCDC71Q8IV32 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC71Q8IV32 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.77■□□□□ 0.59
CCDC71Q8IV32 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC71Q8IV32 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC71Q8IV32 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 AC093787.1-201ENST00000450396 207 ntBASIC18.76■□□□□ 0.59
CCDC71Q8IV32 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 AC120498.10-201ENST00000621827 505 ntBASIC18.76■□□□□ 0.59
CCDC71Q8IV32 AC008694.1-202ENST00000636953 945 ntBASIC18.76■□□□□ 0.59
CCDC71Q8IV32 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC71Q8IV32 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 AC011484.1-201ENST00000377652 1995 ntBASIC18.75■□□□□ 0.59
CCDC71Q8IV32 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 RNA5SP413-201ENST00000516373 109 ntBASIC18.75■□□□□ 0.59
CCDC71Q8IV32 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 AC008175.2-201ENST00000612840 297 ntBASIC18.75■□□□□ 0.59
CCDC71Q8IV32 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC71Q8IV32 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 AL158211.5-201ENST00000623583 2518 ntBASIC18.74■□□□□ 0.59
CCDC71Q8IV32 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC71Q8IV32 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms