Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TCAF2P1-201ENST00000291129 2421 ntBASIC10.07□□□□□ -0.8
LINC01554Q52M75 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC01554Q52M75 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC01554Q52M75 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AFG3L1P-217ENST00000557444 2447 ntBASIC10.06□□□□□ -0.8
LINC01554Q52M75 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AP000974.1-201ENST00000623909 2387 ntBASIC10.06□□□□□ -0.8
LINC01554Q52M75 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AC011551.1-201ENST00000614101 683 ntBASIC10.06□□□□□ -0.8
LINC01554Q52M75 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AC131274.2-201ENST00000580697 1507 ntBASIC10.06□□□□□ -0.8
LINC01554Q52M75 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC01554Q52M75 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC01554Q52M75 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 LONRF2P2-201ENST00000439212 571 ntBASIC10.05□□□□□ -0.8
LINC01554Q52M75 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01554Q52M75 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC01554Q52M75 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms