Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABREP78334 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
GABREP78334 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.14■□□□□ 0.66
GABREP78334 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
GABREP78334 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GABREP78334 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.14■□□□□ 0.65
GABREP78334 MIR1238-201ENST00000408483 83 ntBASIC19.14■□□□□ 0.65
GABREP78334 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.14■□□□□ 0.65
GABREP78334 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.14■□□□□ 0.65
GABREP78334 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GABREP78334 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.14■□□□□ 0.65
GABREP78334 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.14■□□□□ 0.65
GABREP78334 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.14■□□□□ 0.65
GABREP78334 AL031963.3-201ENST00000606441 850 ntBASIC19.14■□□□□ 0.65
GABREP78334 REXO1L10P-201ENST00000615707 1290 ntBASIC19.14■□□□□ 0.65
GABREP78334 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.14■□□□□ 0.65
GABREP78334 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.14■□□□□ 0.65
GABREP78334 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GABREP78334 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.13■□□□□ 0.65
GABREP78334 KRT18P57-201ENST00000443599 1254 ntBASIC19.13■□□□□ 0.65
GABREP78334 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.13■□□□□ 0.65
GABREP78334 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.13■□□□□ 0.65
GABREP78334 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
GABREP78334 LINC01568-207ENST00000641790 1380 ntBASIC19.13■□□□□ 0.65
GABREP78334 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.13■□□□□ 0.65
GABREP78334 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.13■□□□□ 0.65
GABREP78334 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GABREP78334 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GABREP78334 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
GABREP78334 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.12■□□□□ 0.65
GABREP78334 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
GABREP78334 AC113347.1-201ENST00000413321 391 ntBASIC19.12■□□□□ 0.65
GABREP78334 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.12■□□□□ 0.65
GABREP78334 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.12■□□□□ 0.65
GABREP78334 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.12■□□□□ 0.65
GABREP78334 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.12■□□□□ 0.65
GABREP78334 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABREP78334 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
GABREP78334 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
GABREP78334 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GABREP78334 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.11■□□□□ 0.65
GABREP78334 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.11■□□□□ 0.65
GABREP78334 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.11■□□□□ 0.65
GABREP78334 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.11■□□□□ 0.65
GABREP78334 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GABREP78334 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABREP78334 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.1■□□□□ 0.65
GABREP78334 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
GABREP78334 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
GABREP78334 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.1■□□□□ 0.65
GABREP78334 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.1■□□□□ 0.65
GABREP78334 NAPSB-206ENST00000562112 1266 ntBASIC19.1■□□□□ 0.65
GABREP78334 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.1■□□□□ 0.65
GABREP78334 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.1■□□□□ 0.65
GABREP78334 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABREP78334 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.1■□□□□ 0.65
GABREP78334 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms