Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC25A1P53007 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC25A1P53007 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC25A1P53007 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC25A1P53007 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC25A1P53007 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
SLC25A1P53007 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC25A1P53007 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC25A1P53007 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.83■□□□□ 0.45
SLC25A1P53007 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC25A1P53007 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.83■□□□□ 0.45
SLC25A1P53007 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC25A1P53007 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC25A1P53007 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC25A1P53007 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC25A1P53007 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.83■□□□□ 0.45
SLC25A1P53007 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SLC25A1P53007 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC25A1P53007 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC25A1P53007 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC25A1P53007 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC25A1P53007 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC25A1P53007 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC25A1P53007 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC25A1P53007 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC25A1P53007 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC25A1P53007 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
SLC25A1P53007 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
SLC25A1P53007 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SLC25A1P53007 AC116562.4-201ENST00000641316 2276 ntBASIC17.83■□□□□ 0.44
SLC25A1P53007 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC25A1P53007 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC25A1P53007 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC25A1P53007 AC009237.14-201ENST00000609975 1594 ntBASIC17.83■□□□□ 0.44
SLC25A1P53007 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC25A1P53007 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC25A1P53007 TREX1-205ENST00000625293 1783 ntBASIC17.82■□□□□ 0.44
SLC25A1P53007 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SLC25A1P53007 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 MCRIP2P1-201ENST00000394346 511 ntBASIC17.82■□□□□ 0.44
SLC25A1P53007 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC25A1P53007 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC25A1P53007 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SLC25A1P53007 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 RARRES2P4-201ENST00000514074 484 ntBASIC17.82■□□□□ 0.44
SLC25A1P53007 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC25A1P53007 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC25A1P53007 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC25A1P53007 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC25A1P53007 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC25A1P53007 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 KRT8P17-201ENST00000453110 1448 ntBASIC17.81■□□□□ 0.44
SLC25A1P53007 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC25A1P53007 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SLC25A1P53007 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC25A1P53007 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.81■□□□□ 0.44
SLC25A1P53007 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC25A1P53007 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC25A1P53007 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC25A1P53007 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC25A1P53007 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC25A1P53007 MFSD11-216ENST00000590393 1141 ntBASIC17.8■□□□□ 0.44
SLC25A1P53007 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 MIR6821-201ENST00000617625 74 ntBASIC17.8■□□□□ 0.44
SLC25A1P53007 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC25A1P53007 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms