Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX6P35712 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
SOX6P35712 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX6P35712 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 OR2I1P-207ENST00000453522 948 ntBASIC17.98■□□□□ 0.47
SOX6P35712 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX6P35712 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.98■□□□□ 0.47
SOX6P35712 AC131212.1-201ENST00000613771 668 ntBASIC17.98■□□□□ 0.47
SOX6P35712 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.98■□□□□ 0.47
SOX6P35712 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SOX6P35712 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SOX6P35712 Z82202.1-201ENST00000623446 1880 ntBASIC17.98■□□□□ 0.47
SOX6P35712 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.98■□□□□ 0.47
SOX6P35712 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX6P35712 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SOX6P35712 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SOX6P35712 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX6P35712 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SOX6P35712 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
SOX6P35712 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.97■□□□□ 0.47
SOX6P35712 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SOX6P35712 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 AL117332.1-201ENST00000622628 974 ntBASIC17.97■□□□□ 0.47
SOX6P35712 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.97■□□□□ 0.47
SOX6P35712 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.97■□□□□ 0.47
SOX6P35712 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.97■□□□□ 0.47
SOX6P35712 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SOX6P35712 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.97■□□□□ 0.47
SOX6P35712 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SOX6P35712 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SOX6P35712 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SOX6P35712 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX6P35712 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 MIR3621-201ENST00000580529 85 ntBASIC17.96■□□□□ 0.47
SOX6P35712 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.96■□□□□ 0.47
SOX6P35712 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.96■□□□□ 0.47
SOX6P35712 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX6P35712 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.96■□□□□ 0.47
SOX6P35712 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX6P35712 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.96■□□□□ 0.47
SOX6P35712 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.96■□□□□ 0.46
SOX6P35712 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.96■□□□□ 0.46
SOX6P35712 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SOX6P35712 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.95■□□□□ 0.46
SOX6P35712 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX6P35712 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX6P35712 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX6P35712 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms