Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.3■□□□□ 0.52
HTR1AP08908 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HTR1AP08908 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR1AP08908 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HTR1AP08908 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.3■□□□□ 0.52
HTR1AP08908 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HTR1AP08908 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HTR1AP08908 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HTR1AP08908 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
HTR1AP08908 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HTR1AP08908 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HTR1AP08908 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HTR1AP08908 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.29■□□□□ 0.52
HTR1AP08908 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.29■□□□□ 0.52
HTR1AP08908 MIR4767-201ENST00000582827 78 ntBASIC18.29■□□□□ 0.52
HTR1AP08908 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.29■□□□□ 0.52
HTR1AP08908 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.29■□□□□ 0.52
HTR1AP08908 AC233992.3-201ENST00000607491 485 ntBASIC18.29■□□□□ 0.52
HTR1AP08908 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.29■□□□□ 0.52
HTR1AP08908 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.29■□□□□ 0.52
HTR1AP08908 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.29■□□□□ 0.52
HTR1AP08908 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HTR1AP08908 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.28■□□□□ 0.52
HTR1AP08908 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HTR1AP08908 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.28■□□□□ 0.52
HTR1AP08908 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
HTR1AP08908 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 IGHV3-19-201ENST00000521488 291 ntBASIC18.28■□□□□ 0.52
HTR1AP08908 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.28■□□□□ 0.52
HTR1AP08908 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.28■□□□□ 0.52
HTR1AP08908 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
HTR1AP08908 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HTR1AP08908 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HTR1AP08908 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HTR1AP08908 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HTR1AP08908 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.27■□□□□ 0.52
HTR1AP08908 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.27■□□□□ 0.52
HTR1AP08908 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.27■□□□□ 0.52
HTR1AP08908 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HTR1AP08908 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1AP08908 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1AP08908 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1AP08908 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1AP08908 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1AP08908 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HTR1AP08908 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.27■□□□□ 0.51
HTR1AP08908 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HTR1AP08908 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HTR1AP08908 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1AP08908 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
HTR1AP08908 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HTR1AP08908 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.26■□□□□ 0.51
HTR1AP08908 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HTR1AP08908 MIR2861-201ENST00000636310 90 ntBASIC18.26■□□□□ 0.51
HTR1AP08908 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HTR1AP08908 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
HTR1AP08908 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HTR1AP08908 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.26■□□□□ 0.51
HTR1AP08908 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1AP08908 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1AP08908 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.25■□□□□ 0.51
HTR1AP08908 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
HTR1AP08908 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1AP08908 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HTR1AP08908 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms