Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.05■□□□□ 0.64
PDLIM1O00151 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PDLIM1O00151 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.05■□□□□ 0.64
PDLIM1O00151 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM1O00151 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PDLIM1O00151 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM1O00151 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 AC123595.1-201ENST00000440769 1046 ntBASIC19.04■□□□□ 0.64
PDLIM1O00151 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.04■□□□□ 0.64
PDLIM1O00151 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.04■□□□□ 0.64
PDLIM1O00151 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.04■□□□□ 0.64
PDLIM1O00151 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDLIM1O00151 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDLIM1O00151 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PDLIM1O00151 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 TPRG1LP1-201ENST00000598702 760 ntBASIC19.03■□□□□ 0.64
PDLIM1O00151 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM1O00151 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PDLIM1O00151 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.03■□□□□ 0.64
PDLIM1O00151 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.03■□□□□ 0.64
PDLIM1O00151 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.03■□□□□ 0.64
PDLIM1O00151 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PDLIM1O00151 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM1O00151 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM1O00151 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.02■□□□□ 0.64
PDLIM1O00151 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.02■□□□□ 0.64
PDLIM1O00151 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM1O00151 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
PDLIM1O00151 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM1O00151 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM1O00151 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PDLIM1O00151 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM1O00151 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM1O00151 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.02■□□□□ 0.64
PDLIM1O00151 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.02■□□□□ 0.64
PDLIM1O00151 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PDLIM1O00151 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDLIM1O00151 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDLIM1O00151 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDLIM1O00151 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PDLIM1O00151 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.01■□□□□ 0.63
PDLIM1O00151 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.01■□□□□ 0.63
PDLIM1O00151 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.01■□□□□ 0.63
PDLIM1O00151 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM1O00151 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.01■□□□□ 0.63
PDLIM1O00151 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.01■□□□□ 0.63
PDLIM1O00151 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
PDLIM1O00151 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM1O00151 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM1O00151 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PDLIM1O00151 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 AC005332.7-201ENST00000614046 2005 ntBASIC19■□□□□ 0.63
PDLIM1O00151 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM1O00151 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms