Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB1Q9Y5G3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PCDHGB1Q9Y5G3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGB1Q9Y5G3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 AC233992.3-201ENST00000607491 485 ntBASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 TREX1-205ENST00000625293 1783 ntBASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 AP004607.4-201ENST00000530158 1459 ntBASIC18.39■□□□□ 0.53
PCDHGB1Q9Y5G3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 IGHV3-19-201ENST00000521488 291 ntBASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 AC126544.1-201ENST00000580842 1059 ntBASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB1Q9Y5G3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGB1Q9Y5G3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGB1Q9Y5G3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 AL138781.2-201ENST00000617896 1843 ntBASIC18.35■□□□□ 0.53
PCDHGB1Q9Y5G3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms