Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 FAM210CP-201ENST00000445714 574 ntBASIC19.64■□□□□ 0.73
SATB2Q9UPW6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SATB2Q9UPW6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 LINC01023-201ENST00000606054 436 ntBASIC19.63■□□□□ 0.73
SATB2Q9UPW6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SATB2Q9UPW6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SATB2Q9UPW6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 AC012618.2-201ENST00000428058 849 ntBASIC19.61■□□□□ 0.73
SATB2Q9UPW6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.61■□□□□ 0.73
SATB2Q9UPW6 FEM1AP4-201ENST00000443167 1987 ntBASIC19.61■□□□□ 0.73
SATB2Q9UPW6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SATB2Q9UPW6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms