Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 AC007322.3-201ENST00000426526 701 ntBASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42EP4Q9H3Q1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.45■□□□□ 0.87
CDC42EP4Q9H3Q1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CDC42EP4Q9H3Q1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 AC104187.1-201ENST00000607510 612 ntBASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 AC008406.3-201ENST00000620001 1374 ntBASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.45■□□□□ 0.86
CDC42EP4Q9H3Q1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CDC42EP4Q9H3Q1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 AP001160.3-201ENST00000601484 763 ntBASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 FAM21FP-204ENST00000608637 956 ntBASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42EP4Q9H3Q1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDC42EP4Q9H3Q1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms