Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
AP3S2P59780 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
AP3S2P59780 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.27■□□□□ 0.36
AP3S2P59780 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.27■□□□□ 0.36
AP3S2P59780 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
AP3S2P59780 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.27■□□□□ 0.36
AP3S2P59780 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S2P59780 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S2P59780 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S2P59780 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S2P59780 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
AP3S2P59780 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S2P59780 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
AP3S2P59780 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S2P59780 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
AP3S2P59780 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP3S2P59780 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
AP3S2P59780 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP3S2P59780 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
AP3S2P59780 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
AP3S2P59780 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.26■□□□□ 0.35
AP3S2P59780 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.26■□□□□ 0.35
AP3S2P59780 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.26■□□□□ 0.35
AP3S2P59780 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3S2P59780 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.26■□□□□ 0.35
AP3S2P59780 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
AP3S2P59780 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
AP3S2P59780 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S2P59780 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S2P59780 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S2P59780 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3S2P59780 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3S2P59780 NEFHP1-201ENST00000412845 2629 ntBASIC17.25■□□□□ 0.35
AP3S2P59780 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S2P59780 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S2P59780 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S2P59780 MIR4787-201ENST00000607364 84 ntBASIC17.25■□□□□ 0.35
AP3S2P59780 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.25■□□□□ 0.35
AP3S2P59780 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3S2P59780 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3S2P59780 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3S2P59780 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.25■□□□□ 0.35
AP3S2P59780 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP3S2P59780 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP3S2P59780 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
AP3S2P59780 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP3S2P59780 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
AP3S2P59780 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3S2P59780 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 TREX1-205ENST00000625293 1783 ntBASIC17.24■□□□□ 0.35
AP3S2P59780 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3S2P59780 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
AP3S2P59780 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.24■□□□□ 0.35
AP3S2P59780 AP004607.4-201ENST00000530158 1459 ntBASIC17.24■□□□□ 0.35
AP3S2P59780 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3S2P59780 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP3S2P59780 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
AP3S2P59780 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms