Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN12P56749 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN12P56749 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN12P56749 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN12P56749 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 MIR572-201ENST00000384983 95 ntBASIC17.46■□□□□ 0.39
CLDN12P56749 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN12P56749 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN12P56749 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN12P56749 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN12P56749 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN12P56749 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN12P56749 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.46■□□□□ 0.38
CLDN12P56749 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CLDN12P56749 AC116050.2-201ENST00000612102 1779 ntBASIC17.45■□□□□ 0.38
CLDN12P56749 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLDN12P56749 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 AC020763.4-201ENST00000623414 4170 ntBASIC17.45■□□□□ 0.38
CLDN12P56749 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN12P56749 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN12P56749 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN12P56749 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CLDN12P56749 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN12P56749 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN12P56749 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLDN12P56749 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.45■□□□□ 0.38
CLDN12P56749 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN12P56749 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN12P56749 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN12P56749 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CLDN12P56749 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN12P56749 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CLDN12P56749 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN12P56749 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN12P56749 TMEM179-206ENST00000616017 1645 ntBASIC17.44■□□□□ 0.38
CLDN12P56749 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDN12P56749 AC027682.1-201ENST00000562846 899 ntBASIC17.44■□□□□ 0.38
CLDN12P56749 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN12P56749 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN12P56749 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLDN12P56749 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDN12P56749 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN12P56749 AC138932.1-201ENST00000534164 6830 ntBASIC17.44■□□□□ 0.38
CLDN12P56749 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN12P56749 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN12P56749 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN12P56749 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN12P56749 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.43■□□□□ 0.38
CLDN12P56749 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.43■□□□□ 0.38
CLDN12P56749 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLDN12P56749 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN12P56749 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms