Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH1P12830 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH1P12830 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH1P12830 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH1P12830 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.6■□□□□ 0.73
CDH1P12830 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH1P12830 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CDH1P12830 AL121832.2-201ENST00000610979 668 ntBASIC19.6■□□□□ 0.73
CDH1P12830 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH1P12830 AC020907.5-201ENST00000624372 1936 ntBASIC19.6■□□□□ 0.73
CDH1P12830 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH1P12830 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH1P12830 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH1P12830 AC092720.2-201ENST00000602388 1665 ntBASIC19.59■□□□□ 0.73
CDH1P12830 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH1P12830 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH1P12830 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH1P12830 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH1P12830 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH1P12830 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH1P12830 KRT18P68-201ENST00000392293 1000 ntBASIC19.59■□□□□ 0.73
CDH1P12830 AC083906.2-201ENST00000511578 360 ntBASIC19.59■□□□□ 0.73
CDH1P12830 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH1P12830 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH1P12830 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH1P12830 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH1P12830 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.59■□□□□ 0.73
CDH1P12830 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH1P12830 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH1P12830 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH1P12830 MKRN4P-201ENST00000444706 1521 ntBASIC19.59■□□□□ 0.73
CDH1P12830 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
CDH1P12830 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH1P12830 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH1P12830 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH1P12830 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CDH1P12830 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH1P12830 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CDH1P12830 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.58■□□□□ 0.73
CDH1P12830 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH1P12830 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH1P12830 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH1P12830 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH1P12830 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.58■□□□□ 0.73
CDH1P12830 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH1P12830 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.58■□□□□ 0.72
CDH1P12830 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.58■□□□□ 0.72
CDH1P12830 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH1P12830 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.58■□□□□ 0.72
CDH1P12830 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDH1P12830 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.58■□□□□ 0.72
CDH1P12830 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH1P12830 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH1P12830 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH1P12830 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH1P12830 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDH1P12830 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH1P12830 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH1P12830 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CDH1P12830 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDH1P12830 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH1P12830 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 NCF1B-203ENST00000435988 1254 ntBASIC19.57■□□□□ 0.72
CDH1P12830 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.57■□□□□ 0.72
CDH1P12830 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH1P12830 AC105020.6-201ENST00000621523 1217 ntBASIC19.57■□□□□ 0.72
CDH1P12830 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDH1P12830 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH1P12830 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDH1P12830 PCDHAC2-203ENST00000615316 3011 ntBASIC19.57■□□□□ 0.72
CDH1P12830 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 KRT17P1-201ENST00000399211 1546 ntBASIC19.56■□□□□ 0.72
CDH1P12830 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDH1P12830 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDH1P12830 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH1P12830 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH1P12830 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms