Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC13.57□□□□□ -0.24
SNCGO76070 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
SNCGO76070 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SNCGO76070 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCGO76070 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC13.56□□□□□ -0.24
SNCGO76070 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC13.56□□□□□ -0.24
SNCGO76070 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCGO76070 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC13.56□□□□□ -0.24
SNCGO76070 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 ZNRF2P2-203ENST00000454624 420 ntBASIC13.56□□□□□ -0.24
SNCGO76070 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.56□□□□□ -0.24
SNCGO76070 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SNCGO76070 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SNCGO76070 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SNCGO76070 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.56□□□□□ -0.24
SNCGO76070 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SNCGO76070 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCGO76070 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.55□□□□□ -0.24
SNCGO76070 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SNCGO76070 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SNCGO76070 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 AC022616.5-201ENST00000518796 181 ntBASIC13.55□□□□□ -0.24
SNCGO76070 GAK-223ENST00000628912 497 ntTSL 5 BASIC13.55□□□□□ -0.24
SNCGO76070 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCGO76070 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SNCGO76070 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 AC116562.4-201ENST00000641316 2276 ntBASIC13.55□□□□□ -0.24
SNCGO76070 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.55□□□□□ -0.24
SNCGO76070 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SNCGO76070 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNCGO76070 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SNCGO76070 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SNCGO76070 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SNCGO76070 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SNCGO76070 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCGO76070 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.54□□□□□ -0.24
SNCGO76070 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNCGO76070 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNCGO76070 MIR3648-2-201ENST00000581792 180 ntBASIC13.54□□□□□ -0.24
SNCGO76070 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCGO76070 MIR3648-1-201ENST00000615959 180 ntBASIC13.54□□□□□ -0.24
SNCGO76070 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.54□□□□□ -0.24
SNCGO76070 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNCGO76070 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms