Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PPP2R3B-203ENST00000445792 1998 ntTSL 221.49■■□□□ 1.034e-8■■□□□ 12.4
PRPF8Q6P2Q9 SH3BP4-204ENST00000416021 593 ntTSL 317.67■□□□□ 0.429e-15■■□□□ 12.4
PRPF8Q6P2Q9 SH3BP4-205ENST00000444916 570 ntTSL 412.08□□□□□ -0.489e-15■■□□□ 12.4
PRPF8Q6P2Q9 SH3BP4-206ENST00000446904 829 ntTSL 39.04□□□□□ -0.969e-15■■□□□ 12.4
PRPF8Q6P2Q9 SH3BP4-207ENST00000454947 500 ntTSL 47.78□□□□□ -1.169e-15■■□□□ 12.4
PRPF8Q6P2Q9 NAA10-214ENST00000482485 1075 ntTSL 213.44□□□□□ -0.261e-8■■□□□ 12.4
PRPF8Q6P2Q9 MAN2A2-218ENST00000559999 529 ntTSL 413.23□□□□□ -0.291e-7■■□□□ 12.4
PRPF8Q6P2Q9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.311e-8■■□□□ 12.4
PRPF8Q6P2Q9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.621e-8■■□□□ 12.4
PRPF8Q6P2Q9 LRIG2-205ENST00000492207 5076 ntTSL 54.18□□□□□ -1.742e-6■■□□□ 12.4
PRPF8Q6P2Q9 PDAP1-204ENST00000496335 302 ntTSL 312.4□□□□□ -0.427e-9■■□□□ 12.4
PRPF8Q6P2Q9 CFB-280ENST00000482312 764 ntTSL 26.52□□□□□ -1.372e-10■■□□□ 12.4
PRPF8Q6P2Q9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.01□□□□□ -0.013e-12■■□□□ 12.4
PRPF8Q6P2Q9 URM1-206ENST00000483206 731 ntTSL 213.25□□□□□ -0.292e-7■■□□□ 12.4
PRPF8Q6P2Q9 MCF2L-219ENST00000453297 1819 ntTSL 519.43■□□□□ 0.71e-6■■□□□ 12.4
PRPF8Q6P2Q9 MCF2L-201ENST00000261963 2419 ntTSL 1 (best)17.07■□□□□ 0.321e-6■■□□□ 12.4
PRPF8Q6P2Q9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.053e-6■■□□□ 12.4
PRPF8Q6P2Q9 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.483e-6■■□□□ 12.4
PRPF8Q6P2Q9 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.483e-6■■□□□ 12.4
PRPF8Q6P2Q9 TMEM219-206ENST00000569481 443 ntTSL 310.53□□□□□ -0.723e-6■■□□□ 12.4
PRPF8Q6P2Q9 TMEM219-207ENST00000570255 926 ntTSL 29.91□□□□□ -0.823e-6■■□□□ 12.4
PRPF8Q6P2Q9 MINK1-206ENST00000572304 559 ntTSL 412.23□□□□□ -0.452e-16■■□□□ 12.4
PRPF8Q6P2Q9 STARD10-205ENST00000535267 579 ntTSL 222.26■■□□□ 1.154e-10■■□□□ 12.4
PRPF8Q6P2Q9 STARD10-221ENST00000546314 620 ntTSL 313.73□□□□□ -0.214e-10■■□□□ 12.4
PRPF8Q6P2Q9 OBSL1-209ENST00000465589 571 ntTSL 316.5■□□□□ 0.238e-27■■□□□ 12.4
PRPF8Q6P2Q9 DNAJC11-206ENST00000465508 3014 ntTSL 210.45□□□□□ -0.742e-6■■□□□ 12.4
PRPF8Q6P2Q9 CYP2W1-205ENST00000468456 557 ntTSL 415.02■□□□□ -05e-15■■□□□ 12.4
PRPF8Q6P2Q9 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.784e-8■■□□□ 12.4
PRPF8Q6P2Q9 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC9.86□□□□□ -0.834e-8■■□□□ 12.4
PRPF8Q6P2Q9 ING5-206ENST00000482774 2376 ntTSL 313.32□□□□□ -0.288e-9■■□□□ 12.4
PRPF8Q6P2Q9 ING5-210ENST00000492488 822 ntTSL 213.1□□□□□ -0.318e-9■■□□□ 12.4
PRPF8Q6P2Q9 ING5-209ENST00000489509 920 ntTSL 212.85□□□□□ -0.358e-9■■□□□ 12.4
PRPF8Q6P2Q9 ING5-204ENST00000445620 662 ntTSL 35.35□□□□□ -1.558e-9■■□□□ 12.4
PRPF8Q6P2Q9 POLG-209ENST00000530715 372 ntTSL 314.99□□□□□ -0.016e-7■■□□□ 12.4
PRPF8Q6P2Q9 POLG-207ENST00000528881 524 ntTSL 56.94□□□□□ -1.36e-7■■□□□ 12.4
PRPF8Q6P2Q9 GALT-225ENST00000556403 568 ntTSL 412.77□□□□□ -0.377e-10■■□□□ 12.4
PRPF8Q6P2Q9 GALT-214ENST00000554330 558 ntTSL 411.32□□□□□ -0.67e-10■■□□□ 12.4
PRPF8Q6P2Q9 GALT-227ENST00000557541 595 ntTSL 510.65□□□□□ -0.77e-10■■□□□ 12.4
PRPF8Q6P2Q9 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.93□□□□□ -1.462e-8■■□□□ 12.4
PRPF8Q6P2Q9 TBPL1-207ENST00000481694 284 ntTSL 20.63□□□□□ -2.315e-6■■□□□ 12.4
PRPF8Q6P2Q9 DAB2IP-204ENST00000394340 1006 ntTSL 314.58□□□□□ -0.082e-9■■□□□ 12.4
PRPF8Q6P2Q9 DAB2IP-206ENST00000436835 928 ntTSL 312.21□□□□□ -0.462e-9■■□□□ 12.4
PRPF8Q6P2Q9 ERBB2-207ENST00000578502 497 ntTSL 58.98□□□□□ -0.973e-10■■□□□ 12.4
PRPF8Q6P2Q9 PSMA6-212ENST00000556167 601 ntTSL 213.73□□□□□ -0.211e-10■■□□□ 12.4
PRPF8Q6P2Q9 DDB1-213ENST00000539332 1767 ntTSL 27.22□□□□□ -1.253e-7■■□□□ 12.3
PRPF8Q6P2Q9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.632e-11■■□□□ 12.3
PRPF8Q6P2Q9 LRRD1-202ENST00000422722 3511 ntTSL 29.66□□□□□ -0.862e-11■■□□□ 12.3
PRPF8Q6P2Q9 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.04□□□□□ -1.442e-11■■□□□ 12.3
PRPF8Q6P2Q9 EVL-206ENST00000553799 608 ntTSL 54.92□□□□□ -1.622e-11■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.19■□□□□ 0.026e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.19□□□□□ -0.146e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.62□□□□□ -0.236e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.36e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.346e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-208ENST00000471308 2087 ntTSL 212.86□□□□□ -0.356e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-216ENST00000497390 2434 ntTSL 212.56□□□□□ -0.46e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-218ENST00000498822 2547 ntTSL 212.33□□□□□ -0.446e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.566e-7■■□□□ 12.3
PRPF8Q6P2Q9 PCBP4-215ENST00000492809 2599 ntTSL 210.87□□□□□ -0.676e-7■■□□□ 12.3
PRPF8Q6P2Q9 SREBF1-221ENST00000583080 482 ntTSL 514.29□□□□□ -0.122e-8■■□□□ 12.3
PRPF8Q6P2Q9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.955e-7■■□□□ 12.3
PRPF8Q6P2Q9 ZNF787-201ENST00000586787 386 ntTSL 1 (best)15.72■□□□□ 0.115e-7■■□□□ 12.3
PRPF8Q6P2Q9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.67□□□□□ -0.065e-7■■□□□ 12.3
PRPF8Q6P2Q9 MYLK-212ENST00000508240 820 ntTSL 412.09□□□□□ -0.472e-6■■□□□ 12.3
PRPF8Q6P2Q9 DECR2-207ENST00000461749 2062 ntTSL 213.83□□□□□ -0.23e-8■■□□□ 12.3
PRPF8Q6P2Q9 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.576e-8■■□□□ 12.3
PRPF8Q6P2Q9 PIEZO2-209ENST00000579949 3682 ntTSL 23.69□□□□□ -1.822e-7■■□□□ 12.3
PRPF8Q6P2Q9 ERBB3-216ENST00000550869 572 ntTSL 410.06□□□□□ -0.85e-7■■□□□ 12.3
PRPF8Q6P2Q9 TRIM8-204ENST00000487927 761 ntTSL 317.53■□□□□ 0.46e-10■■□□□ 12.3
PRPF8Q6P2Q9 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.75□□□□□ -1.491e-7■■□□□ 12.3
PRPF8Q6P2Q9 STRN4-220ENST00000600710 565 ntTSL 511.83□□□□□ -0.512e-6■■□□□ 12.3
PRPF8Q6P2Q9 STRN4-212ENST00000596012 560 ntTSL 410.52□□□□□ -0.732e-6■■□□□ 12.3
PRPF8Q6P2Q9 HMGCS1-204ENST00000507293 708 ntTSL 1 (best)10□□□□□ -0.812e-15■■□□□ 12.3
PRPF8Q6P2Q9 CREBBP-207ENST00000572569 553 ntTSL 410.27□□□□□ -0.771e-7■■□□□ 12.3
PRPF8Q6P2Q9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.46□□□□□ -0.268e-8■■□□□ 12.3
PRPF8Q6P2Q9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.93□□□□□ -0.58e-8■■□□□ 12.3
PRPF8Q6P2Q9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.67■■□□□ 1.542e-10■■□□□ 12.3
PRPF8Q6P2Q9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.67■■□□□ 1.542e-10■■□□□ 12.3
PRPF8Q6P2Q9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.794e-18■■□□□ 12.3
PRPF8Q6P2Q9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.735e-9■■□□□ 12.3
PRPF8Q6P2Q9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.562e-10■■□□□ 12.3
PRPF8Q6P2Q9 COL9A3-210ENST00000472880 959 ntTSL 317.02■□□□□ 0.322e-10■■□□□ 12.3
PRPF8Q6P2Q9 MIEF1-214ENST00000494219 592 ntTSL 216.71■□□□□ 0.276e-7■■□□□ 12.3
PRPF8Q6P2Q9 COL9A3-203ENST00000462700 1237 ntTSL 315.81■□□□□ 0.122e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.67■□□□□ 0.12e-10■■□□□ 12.3
PRPF8Q6P2Q9 COL9A3-214ENST00000490398 496 ntTSL 415.32■□□□□ 0.042e-10■■□□□ 12.3
PRPF8Q6P2Q9 COL9A3-212ENST00000481800 548 ntTSL 414.88□□□□□ -0.032e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-210ENST00000620634 885 ntTSL 1 (best)14.87□□□□□ -0.032e-10■■□□□ 12.3
PRPF8Q6P2Q9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.53□□□□□ -0.082e-10■■□□□ 12.3
PRPF8Q6P2Q9 COL9A3-205ENST00000466192 2194 ntTSL 214.42□□□□□ -0.12e-10■■□□□ 12.3
PRPF8Q6P2Q9 COL9A3-208ENST00000469802 680 ntTSL 214.15□□□□□ -0.142e-10■■□□□ 12.3
PRPF8Q6P2Q9 EAF1-202ENST00000449565 1037 ntTSL 213.47□□□□□ -0.252e-10■■□□□ 12.3
PRPF8Q6P2Q9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.255e-9■■□□□ 12.3
PRPF8Q6P2Q9 MIEF1-210ENST00000478342 700 ntTSL 213.36□□□□□ -0.276e-7■■□□□ 12.3
PRPF8Q6P2Q9 HM13-208ENST00000464508 855 ntTSL 213.22□□□□□ -0.292e-10■■□□□ 12.3
PRPF8Q6P2Q9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.35e-9■■□□□ 12.3
PRPF8Q6P2Q9 MSTO2P-201ENST00000314835 1709 ntBASIC12.92□□□□□ -0.342e-10■■□□□ 12.3
PRPF8Q6P2Q9 COL9A3-209ENST00000469852 901 ntTSL 312.27□□□□□ -0.452e-10■■□□□ 12.3
PRPF8Q6P2Q9 AC096887.1-202ENST00000607283 690 ntAPPRIS P5 TSL 511.34□□□□□ -0.592e-10■■□□□ 12.3
PRPF8Q6P2Q9 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC11.01□□□□□ -0.651e-6■■□□□ 12.3
Retrieved 100 of 73,762 protein–RNA pairs in 465 ms