RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
PCBP4-218ENST00000498822 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
PCBP4-218ENST00000498822 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
PCBP4-218ENST00000498822 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.07
PCBP4-218ENST00000498822 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
PCBP4-218ENST00000498822 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
PCBP4-218ENST00000498822 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
PCBP4-218ENST00000498822 CHIC1Q5VXU3 224 aa27.05■■□□□ 1.92
PCBP4-218ENST00000498822 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.89
PCBP4-218ENST00000498822 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
PCBP4-218ENST00000498822 LOC105371045A0A1W2PR82 267 aa26.43■■□□□ 1.82
PCBP4-218ENST00000498822 ABCC9O60706 1549 aa26.41■■□□□ 1.82
PCBP4-218ENST00000498822 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
PCBP4-218ENST00000498822 HRCP23327 699 aa26.24■■□□□ 1.79
PCBP4-218ENST00000498822 RSF1Q96T23 1441 aaPredicted RBP26.21■■□□□ 1.79
PCBP4-218ENST00000498822 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
PCBP4-218ENST00000498822 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
PCBP4-218ENST00000498822 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
PCBP4-218ENST00000498822 FAM9AQ8IZU1 332 aaPredicted RBP25.91■■□□□ 1.74
PCBP4-218ENST00000498822 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
PCBP4-218ENST00000498822 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
PCBP4-218ENST00000498822 NACADO15069 1562 aa25.83■■□□□ 1.72
PCBP4-218ENST00000498822 MROH2BQ7Z745 1585 aa25.81■■□□□ 1.72
PCBP4-218ENST00000498822 WIZO95785 1651 aa25.73■■□□□ 1.71
PCBP4-218ENST00000498822 TRIM26Q12899 539 aaPredicted RBP25.65■■□□□ 1.7
PCBP4-218ENST00000498822 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
PCBP4-218ENST00000498822 UNC13AQ9UPW8 1703 aa25.31■■□□□ 1.64
PCBP4-218ENST00000498822 EIF4G1Q04637 1599 aaKnown RBP25.28■■□□□ 1.64
PCBP4-218ENST00000498822 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
PCBP4-218ENST00000498822 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
PCBP4-218ENST00000498822 TOP2AP11388 1531 aaKnown RBP25.14■■□□□ 1.62
PCBP4-218ENST00000498822 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
PCBP4-218ENST00000498822 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
PCBP4-218ENST00000498822 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
PCBP4-218ENST00000498822 TTBK1Q5TCY1 1321 aaPredicted RBP25.03■■□□□ 1.6
PCBP4-218ENST00000498822 SOGA1O94964 1423 aa24.94■■□□□ 1.58
PCBP4-218ENST00000498822 ZEB1P37275 1124 aaPredicted RBP24.91■■□□□ 1.58
PCBP4-218ENST00000498822 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
PCBP4-218ENST00000498822 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
PCBP4-218ENST00000498822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
PCBP4-218ENST00000498822 CEP162Q5TB80 1403 aa24.77■■□□□ 1.56
PCBP4-218ENST00000498822 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
PCBP4-218ENST00000498822 CCER1Q8TC90 406 aaPredicted RBP24.67■■□□□ 1.54
PCBP4-218ENST00000498822 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
PCBP4-218ENST00000498822 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
PCBP4-218ENST00000498822 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
PCBP4-218ENST00000498822 TNIKQ9UKE5 1360 aa24.59■■□□□ 1.53
PCBP4-218ENST00000498822 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
PCBP4-218ENST00000498822 ATAD2BQ9ULI0 1458 aa24.52■■□□□ 1.52
PCBP4-218ENST00000498822 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
PCBP4-218ENST00000498822 EEA1Q15075 1411 aa24.48■■□□□ 1.51
PCBP4-218ENST00000498822 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
PCBP4-218ENST00000498822 RANGAP1P46060 587 aaPredicted RBP24.46■■□□□ 1.51
PCBP4-218ENST00000498822 SCAF1Q9H7N4 1312 aaKnown RBP24.33■■□□□ 1.49
PCBP4-218ENST00000498822 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
PCBP4-218ENST00000498822 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
PCBP4-218ENST00000498822 KIF21BO75037 1637 aa24.29■■□□□ 1.48
PCBP4-218ENST00000498822 CLIP1P30622 1438 aa24.28■■□□□ 1.48
PCBP4-218ENST00000498822 HNRNPUL2Q1KMD3 747 aaKnown RBP24.26■■□□□ 1.47
PCBP4-218ENST00000498822 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
PCBP4-218ENST00000498822 TOP2BQ02880 1626 aa24.15■■□□□ 1.46
PCBP4-218ENST00000498822 VPS8Q8N3P4 1428 aa24.12■■□□□ 1.45
PCBP4-218ENST00000498822 NEUROD1Q13562 356 aa24.07■■□□□ 1.44
PCBP4-218ENST00000498822 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
PCBP4-218ENST00000498822 APLP2Q06481 763 aa24.02■■□□□ 1.44
PCBP4-218ENST00000498822 CUX1P39880 1505 aa24■■□□□ 1.43
PCBP4-218ENST00000498822 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
PCBP4-218ENST00000498822 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
PCBP4-218ENST00000498822 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
PCBP4-218ENST00000498822 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
PCBP4-218ENST00000498822 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
PCBP4-218ENST00000498822 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
PCBP4-218ENST00000498822 PELP1Q8IZL8 1130 aaKnown RBP23.9■■□□□ 1.42
PCBP4-218ENST00000498822 KANK4Q5T7N3 995 aaPredicted RBP23.89■■□□□ 1.41
PCBP4-218ENST00000498822 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
PCBP4-218ENST00000498822 YTHDC1Q96MU7 727 aaKnown RBP23.83■■□□□ 1.41
PCBP4-218ENST00000498822 CFTRP13569 1480 aa23.81■■□□□ 1.4
PCBP4-218ENST00000498822 GTF3C3Q9Y5Q9 886 aa23.79■■□□□ 1.4
PCBP4-218ENST00000498822 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
PCBP4-218ENST00000498822 MIER1Q8N108 512 aa23.73■■□□□ 1.39
PCBP4-218ENST00000498822 CENPBP07199 599 aaPredicted RBP23.71■■□□□ 1.39
PCBP4-218ENST00000498822 ARHGAP35Q9NRY4 1499 aa23.69■■□□□ 1.38
PCBP4-218ENST00000498822 ITGAEP38570 1179 aa23.67■■□□□ 1.38
PCBP4-218ENST00000498822 CUX2O14529 1486 aa23.67■■□□□ 1.38
PCBP4-218ENST00000498822 DHX57Q6P158 1386 aaKnown RBP23.64■■□□□ 1.38
PCBP4-218ENST00000498822 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
PCBP4-218ENST00000498822 IGF1RP08069 1367 aa23.58■■□□□ 1.37
PCBP4-218ENST00000498822 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
PCBP4-218ENST00000498822 CADPSQ9ULU8 1353 aa23.54■■□□□ 1.36
PCBP4-218ENST00000498822 RRBP1Q9P2E9 1410 aaKnown RBP23.53■■□□□ 1.36
PCBP4-218ENST00000498822 P3H3Q8IVL6 736 aa23.52■■□□□ 1.35
PCBP4-218ENST00000498822 CCNB3Q8WWL7 1395 aa23.49■■□□□ 1.35
PCBP4-218ENST00000498822 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
PCBP4-218ENST00000498822 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
PCBP4-218ENST00000498822 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
PCBP4-218ENST00000498822 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
PCBP4-218ENST00000498822 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
PCBP4-218ENST00000498822 NESP48681 1621 aa23.39■■□□□ 1.34
PCBP4-218ENST00000498822 FANCD2Q9BXW9 1451 aa23.39■■□□□ 1.33
PCBP4-218ENST00000498822 RAB3GAP2Q9H2M9 1393 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms