RNA–Protein interactions for RNA: ENST00000556167.1

PSMA6-212, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-212ENST00000556167 NISCHQ9Y2I1 1504 aa39.12■■■■□ 3.85
PSMA6-212ENST00000556167 CCDC180Q9P1Z9 1646 aa34.79■■■■□ 3.16
PSMA6-212ENST00000556167 ABCC9O60706 1549 aa33.64■■■□□ 2.98
PSMA6-212ENST00000556167 ZCCHC6Q5VYS8 1495 aaKnown RBP32.64■■■□□ 2.82
PSMA6-212ENST00000556167 NACADO15069 1562 aa32.61■■■□□ 2.81
PSMA6-212ENST00000556167 RB1CC1Q8TDY2 1594 aa32.58■■■□□ 2.81
PSMA6-212ENST00000556167 DCAF8L2P0C7V8 631 aa32.52■■■□□ 2.8
PSMA6-212ENST00000556167 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
PSMA6-212ENST00000556167 DCAF1Q9Y4B6 1507 aa32.44■■■□□ 2.78
PSMA6-212ENST00000556167 UNC13AQ9UPW8 1703 aa31.88■■■□□ 2.69
PSMA6-212ENST00000556167 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
PSMA6-212ENST00000556167 BICRAQ9NZM4 1560 aa31.51■■■□□ 2.64
PSMA6-212ENST00000556167 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
PSMA6-212ENST00000556167 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
PSMA6-212ENST00000556167 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
PSMA6-212ENST00000556167 DNAJC5BQ9UF47 199 aa30.56■■■□□ 2.48
PSMA6-212ENST00000556167 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.47
PSMA6-212ENST00000556167 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
PSMA6-212ENST00000556167 BAZ1AQ9NRL2 1556 aaPredicted RBP30.35■■■□□ 2.45
PSMA6-212ENST00000556167 SMARCA4P51532 1647 aa30.34■■■□□ 2.45
PSMA6-212ENST00000556167 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
PSMA6-212ENST00000556167 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
PSMA6-212ENST00000556167 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
PSMA6-212ENST00000556167 PEG3Q9GZU2 1588 aa30.05■■■□□ 2.4
PSMA6-212ENST00000556167 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
PSMA6-212ENST00000556167 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
PSMA6-212ENST00000556167 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
PSMA6-212ENST00000556167 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
PSMA6-212ENST00000556167 WIZO95785 1651 aa29.85■■■□□ 2.37
PSMA6-212ENST00000556167 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
PSMA6-212ENST00000556167 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.27
PSMA6-212ENST00000556167 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
PSMA6-212ENST00000556167 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
PSMA6-212ENST00000556167 NESP48681 1621 aa29.16■■■□□ 2.26
PSMA6-212ENST00000556167 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
PSMA6-212ENST00000556167 CFTRP13569 1480 aa29.04■■■□□ 2.24
PSMA6-212ENST00000556167 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
PSMA6-212ENST00000556167 PDS5BQ9NTI5 1447 aa29.02■■■□□ 2.24
PSMA6-212ENST00000556167 PRDM2Q13029 1718 aa29.01■■■□□ 2.23
PSMA6-212ENST00000556167 KIF21AQ7Z4S6 1674 aa28.94■■■□□ 2.22
PSMA6-212ENST00000556167 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
PSMA6-212ENST00000556167 CEP164Q9UPV0 1460 aa28.79■■■□□ 2.2
PSMA6-212ENST00000556167 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
PSMA6-212ENST00000556167 MRC2Q9UBG0 1479 aa28.69■■■□□ 2.18
PSMA6-212ENST00000556167 CUX2O14529 1486 aa28.67■■■□□ 2.18
PSMA6-212ENST00000556167 WDR62O43379 1518 aa28.6■■■□□ 2.17
PSMA6-212ENST00000556167 URB2Q14146 1524 aaKnown RBP28.49■■■□□ 2.15
PSMA6-212ENST00000556167 ABCC8Q09428 1581 aa28.49■■■□□ 2.15
PSMA6-212ENST00000556167 DNMBPQ6XZF7 1577 aa28.42■■■□□ 2.14
PSMA6-212ENST00000556167 TOPBP1Q92547 1522 aa28.39■■■□□ 2.14
PSMA6-212ENST00000556167 CUX1P39880 1505 aa28.25■■■□□ 2.11
PSMA6-212ENST00000556167 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
PSMA6-212ENST00000556167 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
PSMA6-212ENST00000556167 POLA1P09884 1462 aaPredicted RBP28.16■■■□□ 2.1
PSMA6-212ENST00000556167 BIVM-ERCC5R4GMW8 1640 aa28.15■■■□□ 2.1
PSMA6-212ENST00000556167 TOP2BQ02880 1626 aa28.13■■■□□ 2.09
PSMA6-212ENST00000556167 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
PSMA6-212ENST00000556167 SYNJ1O43426 1573 aa28.08■■■□□ 2.09
PSMA6-212ENST00000556167 TARBP1Q13395 1621 aaKnown RBP28.08■■■□□ 2.09
PSMA6-212ENST00000556167 SOGA1O94964 1423 aa28.05■■■□□ 2.08
PSMA6-212ENST00000556167 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
PSMA6-212ENST00000556167 WDR97A6NE52 1622 aa27.98■■■□□ 2.07
PSMA6-212ENST00000556167 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.06
PSMA6-212ENST00000556167 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
PSMA6-212ENST00000556167 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
PSMA6-212ENST00000556167 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.05
PSMA6-212ENST00000556167 TDRD9Q8NDG6 1382 aaKnown RBP27.81■■■□□ 2.04
PSMA6-212ENST00000556167 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
PSMA6-212ENST00000556167 PBRM1Q86U86 1689 aa27.75■■■□□ 2.03
PSMA6-212ENST00000556167 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
PSMA6-212ENST00000556167 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
PSMA6-212ENST00000556167 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
PSMA6-212ENST00000556167 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.02
PSMA6-212ENST00000556167 SNAPC4Q5SXM2 1469 aa27.62■■■□□ 2.01
PSMA6-212ENST00000556167 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
PSMA6-212ENST00000556167 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
PSMA6-212ENST00000556167 CHD1O14646 1710 aa27.58■■■□□ 2.01
PSMA6-212ENST00000556167 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
PSMA6-212ENST00000556167 ADAMTS12P58397 1594 aa27.49■■□□□ 1.99
PSMA6-212ENST00000556167 OSCARQ8IYS5 282 aa27.49■■□□□ 1.99
PSMA6-212ENST00000556167 FBLN2P98095 1184 aa27.46■■□□□ 1.99
PSMA6-212ENST00000556167 CHMP7Q8WUX9 453 aaPredicted RBP27.46■■□□□ 1.99
PSMA6-212ENST00000556167 FHAD1B1AJZ9 1412 aa27.44■■□□□ 1.98
PSMA6-212ENST00000556167 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
PSMA6-212ENST00000556167 CUL7Q14999 1698 aa27.43■■□□□ 1.98
PSMA6-212ENST00000556167 DNAJC5Q9H3Z4 198 aa27.43■■□□□ 1.98
PSMA6-212ENST00000556167 IGF1RP08069 1367 aa27.39■■□□□ 1.98
PSMA6-212ENST00000556167 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
PSMA6-212ENST00000556167 RUSC2Q8N2Y8 1516 aa27.31■■□□□ 1.96
PSMA6-212ENST00000556167 EEA1Q15075 1411 aa27.27■■□□□ 1.96
PSMA6-212ENST00000556167 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
PSMA6-212ENST00000556167 CLASP1Q7Z460 1538 aa27.23■■□□□ 1.95
PSMA6-212ENST00000556167 NUP160Q12769 1436 aa27.22■■□□□ 1.95
PSMA6-212ENST00000556167 CEP170Q5SW79 1584 aa27.19■■□□□ 1.94
PSMA6-212ENST00000556167 RAPGEF2Q9Y4G8 1499 aa27.16■■□□□ 1.94
PSMA6-212ENST00000556167 CSRNP3Q8WYN3 585 aa27.12■■□□□ 1.93
PSMA6-212ENST00000556167 PRXQ9BXM0 1461 aa27.09■■□□□ 1.93
PSMA6-212ENST00000556167 ARHGEF11O15085 1522 aa27.04■■□□□ 1.92
PSMA6-212ENST00000556167 RIMBP3CA6NJZ7 1639 aa27.04■■□□□ 1.92
PSMA6-212ENST00000556167 RIMBP3BA6NNM3 1639 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms