RNA–Protein interactions for RNA: ENST00000492809.5

PCBP4-215, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-215ENST00000492809 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
PCBP4-215ENST00000492809 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
PCBP4-215ENST00000492809 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
PCBP4-215ENST00000492809 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
PCBP4-215ENST00000492809 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
PCBP4-215ENST00000492809 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
PCBP4-215ENST00000492809 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
PCBP4-215ENST00000492809 HRCP23327 699 aa24.89■■□□□ 1.57
PCBP4-215ENST00000492809 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
PCBP4-215ENST00000492809 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
PCBP4-215ENST00000492809 ABCC9O60706 1549 aa24.46■■□□□ 1.51
PCBP4-215ENST00000492809 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
PCBP4-215ENST00000492809 PCGF6Q9BYE7 350 aa24.34■■□□□ 1.49
PCBP4-215ENST00000492809 NACADO15069 1562 aa24.19■■□□□ 1.46
PCBP4-215ENST00000492809 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
PCBP4-215ENST00000492809 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
PCBP4-215ENST00000492809 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
PCBP4-215ENST00000492809 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
PCBP4-215ENST00000492809 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.4
PCBP4-215ENST00000492809 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
PCBP4-215ENST00000492809 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
PCBP4-215ENST00000492809 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
PCBP4-215ENST00000492809 WIZO95785 1651 aa23.66■■□□□ 1.38
PCBP4-215ENST00000492809 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
PCBP4-215ENST00000492809 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
PCBP4-215ENST00000492809 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
PCBP4-215ENST00000492809 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
PCBP4-215ENST00000492809 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
PCBP4-215ENST00000492809 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
PCBP4-215ENST00000492809 SCAF1Q9H7N4 1312 aaKnown RBP23.36■■□□□ 1.33
PCBP4-215ENST00000492809 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
PCBP4-215ENST00000492809 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
PCBP4-215ENST00000492809 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
PCBP4-215ENST00000492809 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
PCBP4-215ENST00000492809 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
PCBP4-215ENST00000492809 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
PCBP4-215ENST00000492809 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
PCBP4-215ENST00000492809 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
PCBP4-215ENST00000492809 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
PCBP4-215ENST00000492809 MYT1Q01538 1121 aa22.94■■□□□ 1.26
PCBP4-215ENST00000492809 ACIN1Q9UKV3 1341 aaKnown RBP22.92■■□□□ 1.26
PCBP4-215ENST00000492809 EEA1Q15075 1411 aa22.79■■□□□ 1.24
PCBP4-215ENST00000492809 NEUROD1Q13562 356 aa22.79■■□□□ 1.24
PCBP4-215ENST00000492809 SOGA1O94964 1423 aa22.79■■□□□ 1.24
PCBP4-215ENST00000492809 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
PCBP4-215ENST00000492809 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
PCBP4-215ENST00000492809 TNIKQ9UKE5 1360 aa22.7■■□□□ 1.22
PCBP4-215ENST00000492809 CENPBP07199 599 aaPredicted RBP22.69■■□□□ 1.22
PCBP4-215ENST00000492809 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
PCBP4-215ENST00000492809 CEP162Q5TB80 1403 aa22.68■■□□□ 1.22
PCBP4-215ENST00000492809 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
PCBP4-215ENST00000492809 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
PCBP4-215ENST00000492809 GTF3C3Q9Y5Q9 886 aa22.65■■□□□ 1.22
PCBP4-215ENST00000492809 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
PCBP4-215ENST00000492809 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
PCBP4-215ENST00000492809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.61■■□□□ 1.21
PCBP4-215ENST00000492809 DIEXFQ68CQ4 756 aaKnown RBP22.6■■□□□ 1.21
PCBP4-215ENST00000492809 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
PCBP4-215ENST00000492809 KIF21BO75037 1637 aa22.51■■□□□ 1.19
PCBP4-215ENST00000492809 UBTFP17480 764 aaKnown RBP22.49■■□□□ 1.19
PCBP4-215ENST00000492809 CEP164Q9UPV0 1460 aa22.47■■□□□ 1.19
PCBP4-215ENST00000492809 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
PCBP4-215ENST00000492809 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
PCBP4-215ENST00000492809 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
PCBP4-215ENST00000492809 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
PCBP4-215ENST00000492809 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
PCBP4-215ENST00000492809 CLIP1P30622 1438 aa22.28■■□□□ 1.16
PCBP4-215ENST00000492809 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
PCBP4-215ENST00000492809 ZNF316A6NFI3 1004 aaPredicted RBP22.26■■□□□ 1.15
PCBP4-215ENST00000492809 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.15
PCBP4-215ENST00000492809 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
PCBP4-215ENST00000492809 CUX1P39880 1505 aa22.15■■□□□ 1.14
PCBP4-215ENST00000492809 CFTRP13569 1480 aa22.13■■□□□ 1.13
PCBP4-215ENST00000492809 PRXQ9BXM0 1461 aa22.12■■□□□ 1.13
PCBP4-215ENST00000492809 PRDM2Q13029 1718 aa22.1■■□□□ 1.13
PCBP4-215ENST00000492809 YTHDC1Q96MU7 727 aaKnown RBP22.05■■□□□ 1.12
PCBP4-215ENST00000492809 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
PCBP4-215ENST00000492809 MIER1Q8N108 512 aa22.01■■□□□ 1.11
PCBP4-215ENST00000492809 APLP2Q06481 763 aa21.99■■□□□ 1.11
PCBP4-215ENST00000492809 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
PCBP4-215ENST00000492809 RANGAP1P46060 587 aaPredicted RBP21.94■■□□□ 1.1
PCBP4-215ENST00000492809 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
PCBP4-215ENST00000492809 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
PCBP4-215ENST00000492809 CLSPNQ9HAW4 1339 aa21.83■■□□□ 1.09
PCBP4-215ENST00000492809 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
PCBP4-215ENST00000492809 CUX2O14529 1486 aa21.79■■□□□ 1.08
PCBP4-215ENST00000492809 ARHGAP35Q9NRY4 1499 aa21.78■■□□□ 1.08
PCBP4-215ENST00000492809 IGF1RP08069 1367 aa21.76■■□□□ 1.07
PCBP4-215ENST00000492809 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
PCBP4-215ENST00000492809 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
PCBP4-215ENST00000492809 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
PCBP4-215ENST00000492809 FANCD2Q9BXW9 1451 aa21.65■■□□□ 1.06
PCBP4-215ENST00000492809 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
PCBP4-215ENST00000492809 SUPT16HQ9Y5B9 1047 aaKnown RBP21.65■■□□□ 1.06
PCBP4-215ENST00000492809 MAP3K1Q13233 1512 aa21.61■■□□□ 1.05
PCBP4-215ENST00000492809 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
PCBP4-215ENST00000492809 DHX57Q6P158 1386 aaKnown RBP21.6■■□□□ 1.05
PCBP4-215ENST00000492809 TIAM1Q13009 1591 aa21.58■■□□□ 1.04
PCBP4-215ENST00000492809 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
PCBP4-215ENST00000492809 ABCA10Q8WWZ4 1543 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms