Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 KRT8P36-201ENST00000489121 1440 ntBASIC20.29■□□□□ 0.84
LGSNQ5TDP6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 TMEM179-206ENST00000616017 1645 ntBASIC20.29■□□□□ 0.84
LGSNQ5TDP6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 AC110285.6-201ENST00000617652 491 ntBASIC20.29■□□□□ 0.84
LGSNQ5TDP6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LGSNQ5TDP6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 KRT18P20-201ENST00000548986 1279 ntBASIC20.28■□□□□ 0.84
LGSNQ5TDP6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 AL031432.3-201ENST00000607698 485 ntBASIC20.28■□□□□ 0.84
LGSNQ5TDP6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 DPP3P2-201ENST00000416030 1696 ntBASIC20.28■□□□□ 0.84
LGSNQ5TDP6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LGSNQ5TDP6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 IRS3P-201ENST00000223076 1006 ntBASIC20.27■□□□□ 0.84
LGSNQ5TDP6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 SUDS3P1-201ENST00000505831 966 ntBASIC20.27■□□□□ 0.84
LGSNQ5TDP6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 FAM21FP-204ENST00000608637 956 ntBASIC20.27■□□□□ 0.84
LGSNQ5TDP6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LGSNQ5TDP6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LGSNQ5TDP6 AC116562.4-201ENST00000641316 2276 ntBASIC20.27■□□□□ 0.83
LGSNQ5TDP6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.83
LGSNQ5TDP6 BX323043.1-201ENST00000641006 1765 ntBASIC20.26■□□□□ 0.83
LGSNQ5TDP6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 SLC7A5P2-201ENST00000553010 536 ntBASIC20.26■□□□□ 0.83
LGSNQ5TDP6 CCDC92B-201ENST00000575506 885 ntBASIC20.26■□□□□ 0.83
LGSNQ5TDP6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 MIR6084-201ENST00000622012 110 ntBASIC20.26■□□□□ 0.83
LGSNQ5TDP6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.26■□□□□ 0.83
LGSNQ5TDP6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 AC007322.3-201ENST00000426526 701 ntBASIC20.25■□□□□ 0.83
LGSNQ5TDP6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 AP001160.3-201ENST00000601484 763 ntBASIC20.25■□□□□ 0.83
LGSNQ5TDP6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms