Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLPXO76031 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLPXO76031 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CLPXO76031 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.25■□□□□ 0.51
CLPXO76031 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.25■□□□□ 0.51
CLPXO76031 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.25■□□□□ 0.51
CLPXO76031 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.25■□□□□ 0.51
CLPXO76031 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLPXO76031 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPXO76031 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 AC006455.2-201ENST00000429931 906 ntBASIC18.24■□□□□ 0.51
CLPXO76031 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPXO76031 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.24■□□□□ 0.51
CLPXO76031 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLPXO76031 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPXO76031 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLPXO76031 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLPXO76031 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPXO76031 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLPXO76031 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLPXO76031 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLPXO76031 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CLPXO76031 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPXO76031 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 AC120498.9-201ENST00000339021 3867 ntBASIC18.23■□□□□ 0.51
CLPXO76031 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLPXO76031 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPXO76031 Z82202.1-201ENST00000623446 1880 ntBASIC18.23■□□□□ 0.51
CLPXO76031 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 AC142381.2-201ENST00000566120 298 ntBASIC18.23■□□□□ 0.51
CLPXO76031 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLPXO76031 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPXO76031 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.23■□□□□ 0.51
CLPXO76031 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.23■□□□□ 0.51
CLPXO76031 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPXO76031 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPXO76031 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CLPXO76031 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPXO76031 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLPXO76031 AC079598.2-202ENST00000546624 1451 ntBASIC18.22■□□□□ 0.51
CLPXO76031 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPXO76031 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 UNC93B3-201ENST00000308076 687 ntBASIC18.22■□□□□ 0.51
CLPXO76031 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.22■□□□□ 0.51
CLPXO76031 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLPXO76031 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 DUX4L19-201ENST00000557448 1267 ntBASIC18.22■□□□□ 0.51
CLPXO76031 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPXO76031 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPXO76031 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPXO76031 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLPXO76031 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPXO76031 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms