Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-5A0A0J9YX44 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-5A0A0J9YX44 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV5-5A0A0J9YX44 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-5A0A0J9YX44 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-5A0A0J9YX44 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 AC105265.2-201ENST00000467189 838 ntBASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 SLC7A5P1-201ENST00000568957 537 ntBASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-5A0A0J9YX44 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-5A0A0J9YX44 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 LINC02228-203ENST00000641970 1355 ntBASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-5A0A0J9YX44 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-5A0A0J9YX44 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-5A0A0J9YX44 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRBV5-5A0A0J9YX44 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-5A0A0J9YX44 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-5A0A0J9YX44 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms