Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 AC020763.4-201ENST00000623414 4170 ntBASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 AC123595.1-201ENST00000440769 1046 ntBASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-4A0A0B4J246 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-4A0A0B4J246 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAV8-4A0A0B4J246 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-4A0A0B4J246 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-4A0A0B4J246 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-4A0A0B4J246 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 MIR6084-201ENST00000622012 110 ntBASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-4A0A0B4J246 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms