Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGB1Q9Y5G3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB1Q9Y5G3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGB1Q9Y5G3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB1Q9Y5G3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB1Q9Y5G3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGB1Q9Y5G3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 SUDS3P1-201ENST00000505831 966 ntBASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 AC093484.2-201ENST00000580996 2166 ntBASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGB1Q9Y5G3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 AC055733.4-201ENST00000638462 1354 ntBASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 BX842568.3-201ENST00000418104 571 ntBASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 AL031432.3-201ENST00000607698 485 ntBASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGB1Q9Y5G3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
PCDHGB1Q9Y5G3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
PCDHGB1Q9Y5G3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 TMEM179-206ENST00000616017 1645 ntBASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGB1Q9Y5G3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 NEFHP1-201ENST00000412845 2629 ntBASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGB1Q9Y5G3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms