Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.34■□□□□ 0.21
NKX6-2Q9C056 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NKX6-2Q9C056 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NKX6-2Q9C056 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 MIR4508-201ENST00000584178 70 ntBASIC16.33■□□□□ 0.2
NKX6-2Q9C056 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 AL499627.2-201ENST00000606283 725 ntBASIC16.33■□□□□ 0.2
NKX6-2Q9C056 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NKX6-2Q9C056 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 BCL2-203ENST00000589955 5011 ntBASIC16.32■□□□□ 0.2
NKX6-2Q9C056 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NKX6-2Q9C056 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 AL031602.1-201ENST00000633169 911 ntBASIC16.31■□□□□ 0.2
NKX6-2Q9C056 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NKX6-2Q9C056 AC009102.2-201ENST00000606772 1639 ntBASIC16.3■□□□□ 0.2
NKX6-2Q9C056 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms