Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 AL117332.1-201ENST00000622628 974 ntBASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM11BQ8TCY0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 ATP5G2P3-201ENST00000429083 425 ntBASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 AC006455.2-201ENST00000429931 906 ntBASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 MTDHP2-201ENST00000601468 714 ntBASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 TMEM179-206ENST00000616017 1645 ntBASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 AC007613.1-201ENST00000572811 2597 ntBASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.12□□□□□ -0.31
SMIM11BQ8TCY0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 Z82202.1-201ENST00000623446 1880 ntBASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 AC004987.1-201ENST00000428627 508 ntBASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 BX664725.1-201ENST00000438252 379 ntBASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
SMIM11BQ8TCY0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 YBX1P4-201ENST00000392794 808 ntBASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 AC103834.1-201ENST00000520383 144 ntBASIC13.1□□□□□ -0.31
SMIM11BQ8TCY0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms