Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.07■□□□□ 0.64
NCK1P16333 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 AC004408.2-201ENST00000623613 2777 ntBASIC19.07■□□□□ 0.64
NCK1P16333 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NCK1P16333 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.07■□□□□ 0.64
NCK1P16333 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
NCK1P16333 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 AC027682.1-201ENST00000562846 899 ntBASIC19.07■□□□□ 0.64
NCK1P16333 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.07■□□□□ 0.64
NCK1P16333 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.07■□□□□ 0.64
NCK1P16333 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.07■□□□□ 0.64
NCK1P16333 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
NCK1P16333 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NCK1P16333 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
NCK1P16333 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.06■□□□□ 0.64
NCK1P16333 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NCK1P16333 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.06■□□□□ 0.64
NCK1P16333 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NCK1P16333 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NCK1P16333 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 AC245052.3-201ENST00000450182 901 ntBASIC19.06■□□□□ 0.64
NCK1P16333 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.06■□□□□ 0.64
NCK1P16333 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.06■□□□□ 0.64
NCK1P16333 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.06■□□□□ 0.64
NCK1P16333 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.06■□□□□ 0.64
NCK1P16333 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.06■□□□□ 0.64
NCK1P16333 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
NCK1P16333 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.06■□□□□ 0.64
NCK1P16333 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCK1P16333 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NCK1P16333 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.05■□□□□ 0.64
NCK1P16333 DPP3P2-201ENST00000416030 1696 ntBASIC19.05■□□□□ 0.64
NCK1P16333 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.05■□□□□ 0.64
NCK1P16333 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NCK1P16333 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.05■□□□□ 0.64
NCK1P16333 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.05■□□□□ 0.64
NCK1P16333 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.05■□□□□ 0.64
NCK1P16333 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NCK1P16333 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCK1P16333 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCK1P16333 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCK1P16333 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.04■□□□□ 0.64
NCK1P16333 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCK1P16333 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NCK1P16333 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NCK1P16333 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCK1P16333 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NCK1P16333 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.04■□□□□ 0.64
NCK1P16333 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.04■□□□□ 0.64
NCK1P16333 TNXA-203ENST00000507684 2038 ntBASIC19.04■□□□□ 0.64
NCK1P16333 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCK1P16333 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCK1P16333 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCK1P16333 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.04■□□□□ 0.64
NCK1P16333 AC116050.2-201ENST00000612102 1779 ntBASIC19.04■□□□□ 0.64
NCK1P16333 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCK1P16333 AC005332.7-201ENST00000614046 2005 ntBASIC19.03■□□□□ 0.64
NCK1P16333 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCK1P16333 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
NCK1P16333 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCK1P16333 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCK1P16333 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCK1P16333 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.03■□□□□ 0.64
NCK1P16333 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCK1P16333 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
NCK1P16333 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NCK1P16333 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.03■□□□□ 0.64
NCK1P16333 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.03■□□□□ 0.64
NCK1P16333 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.03■□□□□ 0.64
NCK1P16333 TPRG1LP1-201ENST00000598702 760 ntBASIC19.03■□□□□ 0.64
NCK1P16333 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.03■□□□□ 0.64
NCK1P16333 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCK1P16333 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms