Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 PDLIM5-212ENST00000509333 743 ntTSL 217.58■□□□□ 0.43e-6■■■■■ 150.5
SF3B1O75533 G6PD-205ENST00000439227 1074 ntTSL 517.52■□□□□ 0.43e-6■■■■■ 150.5
SF3B1O75533 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.333e-6■■■■■ 150.5
SF3B1O75533 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.313e-6■■■■■ 150.5
SF3B1O75533 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.92■□□□□ 0.33e-6■■■■■ 150.5
SF3B1O75533 TRIP10-206ENST00000596543 545 ntTSL 416.83■□□□□ 0.283e-6■■■■■ 150.5
SF3B1O75533 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.64■□□□□ 0.253e-6■■■■■ 150.5
SF3B1O75533 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.43■□□□□ 0.223e-6■■■■■ 150.5
SF3B1O75533 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.214e-6■■■■■ 150.5
SF3B1O75533 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.083e-6■■■■■ 150.5
SF3B1O75533 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.52■□□□□ 0.073e-6■■■■■ 150.5
SF3B1O75533 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.073e-6■■■■■ 150.5
SF3B1O75533 G6PD-206ENST00000440967 1056 ntTSL 515.42■□□□□ 0.063e-6■■■■■ 150.5
SF3B1O75533 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.052e-6■■■■■ 150.5
SF3B1O75533 FBXO34-203ENST00000554940 577 ntTSL 414.66□□□□□ -0.062e-6■■■■■ 150.5
SF3B1O75533 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC14.47□□□□□ -0.094e-6■■■■■ 150.5
SF3B1O75533 PDLIM5-220ENST00000514830 802 ntTSL 212.85□□□□□ -0.353e-6■■■■■ 150.5
SF3B1O75533 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC11.1□□□□□ -0.633e-6■■■■■ 150.5
SF3B1O75533 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.753e-6■■■■■ 150.5
SF3B1O75533 POMK-202ENST00000518991 564 ntTSL 48.91□□□□□ -0.983e-6■■■■■ 150.5
SF3B1O75533 PDLIM5-214ENST00000510099 554 ntTSL 44.96□□□□□ -1.623e-6■■■■■ 150.5
SF3B1O75533 NCOR2-207ENST00000420698 1752 ntTSL 216.6■□□□□ 0.253e-6■■■■■ 150.4
SF3B1O75533 EIF2D-211ENST00000620382 1274 ntTSL 213.3□□□□□ -0.281e-8■■■■■ 150.4
SF3B1O75533 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC11.7□□□□□ -0.542e-6■■■■■ 150.1
SF3B1O75533 PDLIM5-223ENST00000627587 1853 ntTSL 29.91□□□□□ -0.822e-6■■■■■ 150.1
SF3B1O75533 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.66□□□□□ -0.862e-6■■■■■ 150.1
SF3B1O75533 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC9.04□□□□□ -0.962e-6■■■■■ 150.1
SF3B1O75533 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.982e-6■■■■■ 150.1
SF3B1O75533 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.132e-6■■■■■ 150.1
SF3B1O75533 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.38□□□□□ -1.232e-6■■■■■ 150.1
SF3B1O75533 INPP5A-204ENST00000423490 416 ntTSL 55.94□□□□□ -1.463e-6■■■■■ 149.9
SF3B1O75533 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.515e-6■■■■■ 149.9
SF3B1O75533 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.95■□□□□ 0.465e-6■■■■■ 149.9
SF3B1O75533 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.93■□□□□ 0.465e-6■■■■■ 149.9
SF3B1O75533 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.31■□□□□ 0.365e-6■■■■■ 149.9
SF3B1O75533 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.11e-7■■■■■ 149.7
SF3B1O75533 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC10.46□□□□□ -0.731e-7■■■■■ 149.7
SF3B1O75533 MAP4-206ENST00000423088 899 ntTSL 310.27□□□□□ -0.774e-7■■■■■ 149.7
SF3B1O75533 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.14■□□□□ 0.172e-10■■■■■ 149.7
SF3B1O75533 TPI1-208ENST00000495834 820 ntTSL 212.59□□□□□ -0.392e-10■■■■■ 149.7
SF3B1O75533 TPI1-209ENST00000535434 1587 ntTSL 2 BASIC11.82□□□□□ -0.522e-10■■■■■ 149.7
SF3B1O75533 TPI1-203ENST00000462761 374 ntTSL 311.73□□□□□ -0.532e-10■■■■■ 149.7
SF3B1O75533 TPI1-207ENST00000493987 839 ntTSL 311.7□□□□□ -0.542e-10■■■■■ 149.7
SF3B1O75533 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.142e-7■■■■■ 149.6
SF3B1O75533 PTPN23-206ENST00000602307 5119 ntTSL 212.2□□□□□ -0.462e-7■■■■■ 149.6
SF3B1O75533 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.42■■■□□ 2.32e-6■■■■■ 149.3
SF3B1O75533 FAM185A-206ENST00000481697 1262 ntTSL 528.69■■■□□ 2.182e-6■■■■■ 149.3
SF3B1O75533 SPOPL-203ENST00000430968 558 ntTSL 526.77■■□□□ 1.887e-8■■■■■ 149.3
SF3B1O75533 KCTD15-204ENST00000587658 632 ntTSL 326.26■■□□□ 1.794e-6■■■■■ 149.3
SF3B1O75533 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.754e-6■■■■■ 149.3
SF3B1O75533 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.714e-18■■■■■ 149.3
SF3B1O75533 CENPX-203ENST00000577379 861 ntTSL 524.86■■□□□ 1.574e-18■■■■■ 149.3
SF3B1O75533 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.35■■□□□ 1.495e-8■■■■■ 149.3
SF3B1O75533 MROH6-203ENST00000529971 1680 ntAPPRIS ALT2 TSL 524.19■■□□□ 1.464e-18■■■■■ 149.3
SF3B1O75533 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.01■■□□□ 1.432e-6■■■■■ 149.3
SF3B1O75533 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.362e-6■■■■■ 149.3
SF3B1O75533 ZNF346-210ENST00000513587 977 ntTSL 222.81■■□□□ 1.244e-18■■■■■ 149.3
SF3B1O75533 FAM185A-205ENST00000442873 2217 ntTSL 222.35■■□□□ 1.172e-6■■■■■ 149.3
SF3B1O75533 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.21■■□□□ 1.154e-18■■■■■ 149.3
SF3B1O75533 CENPX-211ENST00000585091 739 ntTSL 321.92■■□□□ 1.14e-18■■■■■ 149.3
SF3B1O75533 ZNF346-206ENST00000508155 1622 ntTSL 221.91■■□□□ 1.14e-18■■■■■ 149.3
SF3B1O75533 CORO7-211ENST00000572044 563 ntTSL 421.14■□□□□ 0.972e-6■■■■■ 149.3
SF3B1O75533 SYNJ2-206ENST00000485863 810 ntTSL 320.65■□□□□ 0.97e-8■■■■■ 149.3
SF3B1O75533 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.6■□□□□ 0.894e-18■■■■■ 149.3
SF3B1O75533 CENPX-209ENST00000584514 882 ntTSL 220.59■□□□□ 0.894e-18■■■■■ 149.3
SF3B1O75533 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.53■□□□□ 0.884e-18■■■■■ 149.3
SF3B1O75533 CENPX-205ENST00000580090 752 ntTSL 220.34■□□□□ 0.854e-18■■■■■ 149.3
SF3B1O75533 CENPX-207ENST00000583767 894 ntTSL 320.33■□□□□ 0.854e-18■■■■■ 149.3
SF3B1O75533 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.87■□□□□ 0.774e-18■■■■■ 149.3
SF3B1O75533 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.84■□□□□ 0.774e-18■■■■■ 149.3
SF3B1O75533 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.754e-18■■■■■ 149.3
SF3B1O75533 KCTD15-205ENST00000588637 571 ntTSL 519.51■□□□□ 0.714e-6■■■■■ 149.3
SF3B1O75533 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.582e-6■■■■■ 149.3
SF3B1O75533 CORO7-216ENST00000572549 663 ntTSL 518.68■□□□□ 0.582e-6■■■■■ 149.3
SF3B1O75533 CENPX-204ENST00000579520 702 ntTSL 318.61■□□□□ 0.574e-18■■■■■ 149.3
SF3B1O75533 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.46■□□□□ 0.554e-18■■■■■ 149.3
SF3B1O75533 FAM185A-204ENST00000420217 1958 ntTSL 217.85■□□□□ 0.452e-6■■■■■ 149.3
SF3B1O75533 CENPX-210ENST00000584600 730 ntTSL 217.73■□□□□ 0.434e-18■■■■■ 149.3
SF3B1O75533 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.342e-6■■■■■ 149.3
SF3B1O75533 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.15■□□□□ 0.344e-18■■■■■ 149.3
SF3B1O75533 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.12■□□□□ 0.332e-6■■■■■ 149.3
SF3B1O75533 KCTD15-203ENST00000587559 622 ntTSL 417.04■□□□□ 0.324e-6■■■■■ 149.3
SF3B1O75533 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.272e-6■■■■■ 149.3
SF3B1O75533 BRAT1-206ENST00000493232 5360 ntTSL 216.56■□□□□ 0.244e-18■■■■■ 149.3
SF3B1O75533 TXNRD2-210ENST00000475995 751 ntTSL 516.22■□□□□ 0.192e-6■■■■■ 149.3
SF3B1O75533 BRAT1-204ENST00000469750 5226 ntTSL 216.06■□□□□ 0.164e-18■■■■■ 149.3
SF3B1O75533 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.154e-18■■■■■ 149.3
SF3B1O75533 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.76■□□□□ 0.114e-18■■■■■ 149.3
SF3B1O75533 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.064e-18■■■■■ 149.3
SF3B1O75533 NAGK-210ENST00000465105 581 ntTSL 215.27■□□□□ 0.042e-6■■■■■ 149.3
SF3B1O75533 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.32□□□□□ -0.122e-6■■■■■ 149.3
SF3B1O75533 BRAT1-205ENST00000473879 666 ntTSL 314.23□□□□□ -0.134e-18■■■■■ 149.3
SF3B1O75533 BRAT1-203ENST00000467558 4440 ntTSL 514.15□□□□□ -0.144e-18■■■■■ 149.3
SF3B1O75533 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.84□□□□□ -0.193e-6■■■■■ 149.3
SF3B1O75533 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.22e-6■■■■■ 149.3
SF3B1O75533 NAGK-216ENST00000480411 546 ntTSL 212.96□□□□□ -0.332e-6■■■■■ 149.3
SF3B1O75533 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.82□□□□□ -0.522e-6■■■■■ 149.3
SF3B1O75533 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC10.46□□□□□ -0.742e-6■■■■■ 149.3
SF3B1O75533 PDLIM5-209ENST00000506632 907 ntTSL 39.96□□□□□ -0.822e-9■■■■■ 149.3
SF3B1O75533 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC9.63□□□□□ -0.872e-6■■■■■ 149.3
Retrieved 100 of 46,956 protein–RNA pairs in 1121.2 ms