RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
BRAT1-204ENST00000469750 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
BRAT1-204ENST00000469750 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
BRAT1-204ENST00000469750 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
BRAT1-204ENST00000469750 EHMT2Q96KQ7 1210 aa25.2■■□□□ 1.62
BRAT1-204ENST00000469750 APLP2Q06481 763 aa24.87■■□□□ 1.57
BRAT1-204ENST00000469750 FAM9AQ8IZU1 332 aaPredicted RBP24.63■■□□□ 1.53
BRAT1-204ENST00000469750 PELP1Q8IZL8 1130 aaKnown RBP24.53■■□□□ 1.52
BRAT1-204ENST00000469750 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
BRAT1-204ENST00000469750 MYT1Q01538 1121 aa24.28■■□□□ 1.48
BRAT1-204ENST00000469750 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
BRAT1-204ENST00000469750 PCGF6Q9BYE7 350 aa24.23■■□□□ 1.47
BRAT1-204ENST00000469750 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
BRAT1-204ENST00000469750 ATP1B4Q9UN42 357 aaPredicted RBP24.01■■□□□ 1.43
BRAT1-204ENST00000469750 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
BRAT1-204ENST00000469750 ZEB1P37275 1124 aaPredicted RBP23.91■■□□□ 1.42
BRAT1-204ENST00000469750 CCER1Q8TC90 406 aaPredicted RBP23.89■■□□□ 1.42
BRAT1-204ENST00000469750 CENPBP07199 599 aaPredicted RBP23.75■■□□□ 1.39
BRAT1-204ENST00000469750 ERICH6Q7L0X2 663 aa23.44■■□□□ 1.34
BRAT1-204ENST00000469750 PPARGC1BQ86YN6 1023 aaKnown RBP23.41■■□□□ 1.34
BRAT1-204ENST00000469750 NEFLP07196 543 aa23.31■■□□□ 1.32
BRAT1-204ENST00000469750 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
BRAT1-204ENST00000469750 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
BRAT1-204ENST00000469750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
BRAT1-204ENST00000469750 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
BRAT1-204ENST00000469750 ITGAEP38570 1179 aa23.15■■□□□ 1.3
BRAT1-204ENST00000469750 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
BRAT1-204ENST00000469750 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
BRAT1-204ENST00000469750 LOC105371045A0A1W2PR82 267 aa23.08■■□□□ 1.28
BRAT1-204ENST00000469750 POLR3GLQ9BT43 218 aa22.93■■□□□ 1.26
BRAT1-204ENST00000469750 HRCP23327 699 aa22.88■■□□□ 1.25
BRAT1-204ENST00000469750 ABCC9O60706 1549 aa22.88■■□□□ 1.25
BRAT1-204ENST00000469750 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
BRAT1-204ENST00000469750 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
BRAT1-204ENST00000469750 FAM50AQ14320 339 aaKnown RBP22.61■■□□□ 1.21
BRAT1-204ENST00000469750 DAXXQ9UER7 740 aaPredicted RBP22.59■■□□□ 1.21
BRAT1-204ENST00000469750 SLC4A1APQ9BWU0 796 aaKnown RBP22.53■■□□□ 1.2
BRAT1-204ENST00000469750 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
BRAT1-204ENST00000469750 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
BRAT1-204ENST00000469750 NEUROD1Q13562 356 aa22.34■■□□□ 1.17
BRAT1-204ENST00000469750 FBLN2P98095 1184 aa22.34■■□□□ 1.17
BRAT1-204ENST00000469750 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
BRAT1-204ENST00000469750 ZNF326Q5BKZ1 582 aaKnown RBP22.19■■□□□ 1.14
BRAT1-204ENST00000469750 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
BRAT1-204ENST00000469750 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
BRAT1-204ENST00000469750 ANP32CO43423 234 aa22.1■■□□□ 1.13
BRAT1-204ENST00000469750 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
BRAT1-204ENST00000469750 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
BRAT1-204ENST00000469750 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
BRAT1-204ENST00000469750 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
BRAT1-204ENST00000469750 CDK11AQ9UQ88 783 aaPredicted RBP21.96■■□□□ 1.11
BRAT1-204ENST00000469750 ZNF777Q9ULD5 760 aaPredicted RBP21.93■■□□□ 1.1
BRAT1-204ENST00000469750 BCANQ96GW7 911 aa21.87■■□□□ 1.09
BRAT1-204ENST00000469750 ZBTB47Q9UFB7 747 aaPredicted RBP21.86■■□□□ 1.09
BRAT1-204ENST00000469750 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
BRAT1-204ENST00000469750 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
BRAT1-204ENST00000469750 NEFMP07197 916 aa21.8■■□□□ 1.08
BRAT1-204ENST00000469750 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
BRAT1-204ENST00000469750 CANXP27824 592 aaKnown RBP21.77■■□□□ 1.08
BRAT1-204ENST00000469750 SLC24A1O60721 1099 aa21.73■■□□□ 1.07
BRAT1-204ENST00000469750 ESF1Q9H501 851 aaKnown RBP21.69■■□□□ 1.06
BRAT1-204ENST00000469750 TONSLQ96HA7 1378 aa21.66■■□□□ 1.06
BRAT1-204ENST00000469750 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.06
BRAT1-204ENST00000469750 CHGAP10645 457 aaKnown RBP21.6■■□□□ 1.05
BRAT1-204ENST00000469750 BCL11AQ9H165 835 aa21.58■■□□□ 1.05
BRAT1-204ENST00000469750 STAG3Q9UJ98 1225 aa21.57■■□□□ 1.04
BRAT1-204ENST00000469750 DCAF1Q9Y4B6 1507 aa21.52■■□□□ 1.04
BRAT1-204ENST00000469750 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
BRAT1-204ENST00000469750 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
BRAT1-204ENST00000469750 TSPY4P0CV99 314 aa21.44■■□□□ 1.02
BRAT1-204ENST00000469750 TSPY10P0CW01 314 aa21.44■■□□□ 1.02
BRAT1-204ENST00000469750 MTUS2Q5JR59 1369 aa21.44■■□□□ 1.02
BRAT1-204ENST00000469750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.022e-6■□□□□ 8.5
BRAT1-204ENST00000469750 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
BRAT1-204ENST00000469750 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
BRAT1-204ENST00000469750 ANP32AP39687 249 aaKnown RBP21.4■■□□□ 1.02
BRAT1-204ENST00000469750 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
BRAT1-204ENST00000469750 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
BRAT1-204ENST00000469750 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
BRAT1-204ENST00000469750 CLIP1P30622 1438 aa21.36■■□□□ 1.01
BRAT1-204ENST00000469750 FAM9BQ8IZU0 186 aa21.35■■□□□ 1.01
BRAT1-204ENST00000469750 FKBP8Q14318 412 aa21.3■■□□□ 1
BRAT1-204ENST00000469750 NPM2Q86SE8 214 aaKnown RBP21.29■■□□□ 1
BRAT1-204ENST00000469750 TMC1Q8TDI8 760 aa21.28■■□□□ 1
BRAT1-204ENST00000469750 KDM2AQ9Y2K7 1162 aa21.27■■□□□ 1
BRAT1-204ENST00000469750 GLIPR1L2Q4G1C9 344 aa21.26■□□□□ 0.99
BRAT1-204ENST00000469750 EEA1Q15075 1411 aa21.26■□□□□ 0.99
BRAT1-204ENST00000469750 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
BRAT1-204ENST00000469750 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
BRAT1-204ENST00000469750 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
BRAT1-204ENST00000469750 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
BRAT1-204ENST00000469750 WDR43Q15061 677 aaKnown RBP eCLIP21.2■□□□□ 0.98
BRAT1-204ENST00000469750 UPF2Q9HAU5 1272 aaKnown RBP21.18■□□□□ 0.98
BRAT1-204ENST00000469750 RRP7BPQ9NSQ0 103 aa21.18■□□□□ 0.98
BRAT1-204ENST00000469750 PLEKHD1A6NEE1 506 aa21.17■□□□□ 0.98
BRAT1-204ENST00000469750 MRS2Q9HD23 443 aa21.17■□□□□ 0.98
BRAT1-204ENST00000469750 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.16■□□□□ 0.98
BRAT1-204ENST00000469750 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
BRAT1-204ENST00000469750 NACADO15069 1562 aa21.15■□□□□ 0.98
BRAT1-204ENST00000469750 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms