Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDX4O14627 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.63■□□□□ 0.73
CDX4O14627 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDX4O14627 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDX4O14627 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CDX4O14627 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CDX4O14627 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.62■□□□□ 0.73
CDX4O14627 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
CDX4O14627 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDX4O14627 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.62■□□□□ 0.73
CDX4O14627 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.62■□□□□ 0.73
CDX4O14627 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDX4O14627 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDX4O14627 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.62■□□□□ 0.73
CDX4O14627 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.62■□□□□ 0.73
CDX4O14627 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDX4O14627 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.61■□□□□ 0.73
CDX4O14627 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.61■□□□□ 0.73
CDX4O14627 KRT16P1-201ENST00000399124 1418 ntBASIC19.61■□□□□ 0.73
CDX4O14627 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.61■□□□□ 0.73
CDX4O14627 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.61■□□□□ 0.73
CDX4O14627 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.61■□□□□ 0.73
CDX4O14627 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.61■□□□□ 0.73
CDX4O14627 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.61■□□□□ 0.73
CDX4O14627 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.61■□□□□ 0.73
CDX4O14627 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDX4O14627 C1orf229-201ENST00000623686 2258 ntBASIC19.6■□□□□ 0.73
CDX4O14627 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDX4O14627 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDX4O14627 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.6■□□□□ 0.73
CDX4O14627 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDX4O14627 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDX4O14627 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDX4O14627 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.6■□□□□ 0.73
CDX4O14627 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDX4O14627 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.6■□□□□ 0.73
CDX4O14627 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.6■□□□□ 0.73
CDX4O14627 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.6■□□□□ 0.73
CDX4O14627 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.6■□□□□ 0.73
CDX4O14627 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDX4O14627 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.6■□□□□ 0.73
CDX4O14627 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CDX4O14627 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDX4O14627 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDX4O14627 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.6■□□□□ 0.73
CDX4O14627 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.6■□□□□ 0.73
CDX4O14627 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDX4O14627 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CDX4O14627 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.59■□□□□ 0.73
CDX4O14627 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.59■□□□□ 0.73
CDX4O14627 LIN28AP1-201ENST00000429574 405 ntBASIC19.59■□□□□ 0.73
CDX4O14627 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.59■□□□□ 0.73
CDX4O14627 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.59■□□□□ 0.73
CDX4O14627 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.59■□□□□ 0.73
CDX4O14627 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDX4O14627 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.59■□□□□ 0.73
CDX4O14627 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDX4O14627 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDX4O14627 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
CDX4O14627 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDX4O14627 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
CDX4O14627 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.58■□□□□ 0.73
CDX4O14627 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDX4O14627 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.58■□□□□ 0.73
CDX4O14627 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms