Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 SYT6-210ENST00000641643 1587 ntBASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV34A0A0B4J273 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 AC011484.1-201ENST00000377652 1995 ntBASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 MIR3621-201ENST00000580529 85 ntBASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 AC092720.2-201ENST00000602388 1665 ntBASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV34A0A0B4J273 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV34A0A0B4J273 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TRAV34A0A0B4J273 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV34A0A0B4J273 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV34A0A0B4J273 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV34A0A0B4J273 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV34A0A0B4J273 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV34A0A0B4J273 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV34A0A0B4J273 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 AC136469.2-201ENST00000623944 1028 ntBASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms