Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 MIR1238-201ENST00000408483 83 ntBASIC24.56■■□□□ 1.52
VPS33BQ9H267 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.56■■□□□ 1.52
VPS33BQ9H267 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.56■■□□□ 1.52
VPS33BQ9H267 NAPSB-206ENST00000562112 1266 ntBASIC24.56■■□□□ 1.52
VPS33BQ9H267 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.56■■□□□ 1.52
VPS33BQ9H267 AC242852.2-201ENST00000615738 1807 ntBASIC24.56■■□□□ 1.52
VPS33BQ9H267 AC124283.5-201ENST00000624661 1809 ntBASIC24.56■■□□□ 1.52
VPS33BQ9H267 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.56■■□□□ 1.52
VPS33BQ9H267 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS33BQ9H267 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 AC073508.3-201ENST00000619697 1419 ntBASIC24.55■■□□□ 1.52
VPS33BQ9H267 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
VPS33BQ9H267 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
VPS33BQ9H267 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
VPS33BQ9H267 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 AC027702.1-201ENST00000563810 1770 ntBASIC24.54■■□□□ 1.52
VPS33BQ9H267 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
VPS33BQ9H267 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.54■■□□□ 1.52
VPS33BQ9H267 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.54■■□□□ 1.52
VPS33BQ9H267 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
VPS33BQ9H267 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
VPS33BQ9H267 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.54■■□□□ 1.52
VPS33BQ9H267 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS33BQ9H267 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS33BQ9H267 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS33BQ9H267 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS33BQ9H267 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.53■■□□□ 1.52
VPS33BQ9H267 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.53■■□□□ 1.52
VPS33BQ9H267 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.53■■□□□ 1.52
VPS33BQ9H267 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.53■■□□□ 1.52
VPS33BQ9H267 MIR2861-201ENST00000636310 90 ntBASIC24.53■■□□□ 1.52
VPS33BQ9H267 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS33BQ9H267 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.53■■□□□ 1.52
VPS33BQ9H267 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS33BQ9H267 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS33BQ9H267 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
VPS33BQ9H267 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS33BQ9H267 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 TERF1P1-201ENST00000311003 1181 ntBASIC24.52■■□□□ 1.52
VPS33BQ9H267 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 NIFKP9-201ENST00000419265 221 ntBASIC24.52■■□□□ 1.52
VPS33BQ9H267 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS33BQ9H267 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS33BQ9H267 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS33BQ9H267 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
VPS33BQ9H267 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.51■■□□□ 1.51
VPS33BQ9H267 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.51■■□□□ 1.51
VPS33BQ9H267 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.51■■□□□ 1.51
VPS33BQ9H267 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.51■■□□□ 1.51
VPS33BQ9H267 AC010947.1-201ENST00000623454 693 ntBASIC24.51■■□□□ 1.51
VPS33BQ9H267 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.51■■□□□ 1.51
VPS33BQ9H267 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
VPS33BQ9H267 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS33BQ9H267 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS33BQ9H267 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS33BQ9H267 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.5■■□□□ 1.51
VPS33BQ9H267 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms