Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
S1PR3Q99500 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
S1PR3Q99500 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
S1PR3Q99500 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.69■□□□□ 0.26
S1PR3Q99500 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
S1PR3Q99500 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
S1PR3Q99500 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.68■□□□□ 0.26
S1PR3Q99500 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.68■□□□□ 0.26
S1PR3Q99500 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.68■□□□□ 0.26
S1PR3Q99500 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 FAM21FP-204ENST00000608637 956 ntBASIC16.68■□□□□ 0.26
S1PR3Q99500 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.68■□□□□ 0.26
S1PR3Q99500 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 AC092720.2-201ENST00000602388 1665 ntBASIC16.68■□□□□ 0.26
S1PR3Q99500 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
S1PR3Q99500 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.68■□□□□ 0.26
S1PR3Q99500 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
S1PR3Q99500 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
S1PR3Q99500 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
S1PR3Q99500 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
S1PR3Q99500 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.67■□□□□ 0.26
S1PR3Q99500 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
S1PR3Q99500 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
S1PR3Q99500 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
S1PR3Q99500 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.67■□□□□ 0.26
S1PR3Q99500 MIR2861-201ENST00000636310 90 ntBASIC16.67■□□□□ 0.26
S1PR3Q99500 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.67■□□□□ 0.26
S1PR3Q99500 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.67■□□□□ 0.26
S1PR3Q99500 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
S1PR3Q99500 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
S1PR3Q99500 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
S1PR3Q99500 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.66■□□□□ 0.26
S1PR3Q99500 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.66■□□□□ 0.26
S1PR3Q99500 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.66■□□□□ 0.26
S1PR3Q99500 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.66■□□□□ 0.26
S1PR3Q99500 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
S1PR3Q99500 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.66■□□□□ 0.26
S1PR3Q99500 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
S1PR3Q99500 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
S1PR3Q99500 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms