Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 SLC12A4-217ENST00000576462 673 ntTSL 242.06■■■■■ 4.322e-9■□□□□ 10.9
PABPN1Q86U42 SLC12A4-207ENST00000571299 891 ntTSL 334.39■■■■□ 3.12e-9■□□□□ 10.9
PABPN1Q86U42 ECHDC2-212ENST00000486170 474 ntTSL 240■■■■□ 3.996e-7■□□□□ 10.9
PABPN1Q86U42 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.138e-8■□□□□ 10.9
PABPN1Q86U42 PRPSAP1-201ENST00000324684 1678 ntTSL 2 BASIC18.27■□□□□ 0.528e-8■□□□□ 10.9
PABPN1Q86U42 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC36.08■■■■□ 3.376e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC36.05■■■■□ 3.366e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC33.42■■■□□ 2.946e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC32.38■■■□□ 2.776e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-244ENST00000555650 1588 ntTSL 230.9■■■□□ 2.546e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-271ENST00000557353 1919 ntTSL 229.4■■■□□ 2.36e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.216e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC28.16■■■□□ 2.16e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC28.07■■■□□ 2.086e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC27.78■■■□□ 2.046e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.986e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.986e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC26.54■■□□□ 1.846e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC25.61■■□□□ 1.696e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC25.17■■□□□ 1.626e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-274ENST00000557633 527 ntTSL 322.72■■□□□ 1.236e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.26e-7■□□□□ 10.9
PABPN1Q86U42 NDRG2-258ENST00000556716 2718 ntTSL 221.57■■□□□ 1.046e-7■□□□□ 10.9
PABPN1Q86U42 ATP6V0A1-207ENST00000585828 2139 ntTSL 1 (best)25.88■■□□□ 1.735e-7■□□□□ 10.9
PABPN1Q86U42 ATP6V0A1-214ENST00000587797 1878 ntTSL 223.61■■□□□ 1.375e-7■□□□□ 10.9
PABPN1Q86U42 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC18.99■□□□□ 0.635e-7■□□□□ 10.9
PABPN1Q86U42 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.275e-7■□□□□ 10.9
PABPN1Q86U42 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.195e-7■□□□□ 10.9
PABPN1Q86U42 ATP6V0A1-225ENST00000592831 4652 nt15.79■□□□□ 0.125e-7■□□□□ 10.9
PABPN1Q86U42 ECHDC2-206ENST00000467988 702 ntTSL 540■■■■□ 3.995e-7■□□□□ 10.9
PABPN1Q86U42 ECHDC2-215ENST00000487866 940 ntTSL 529.92■■■□□ 2.385e-7■□□□□ 10.9
PABPN1Q86U42 ECHDC2-214ENST00000487851 471 ntTSL 329.85■■■□□ 2.375e-7■□□□□ 10.9
PABPN1Q86U42 RBM39-241ENST00000496183 632 ntTSL 215.04■□□□□ -05e-16■□□□□ 10.9
PABPN1Q86U42 RBM39-233ENST00000482563 1737 ntTSL 212.4□□□□□ -0.435e-16■□□□□ 10.9
PABPN1Q86U42 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC30.24■■■□□ 2.435e-6■□□□□ 10.9
PABPN1Q86U42 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC15.79■□□□□ 0.125e-6■□□□□ 10.9
PABPN1Q86U42 MAP4K4-209ENST00000421882 3416 ntTSL 514.21□□□□□ -0.145e-6■□□□□ 10.9
PABPN1Q86U42 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC12.28□□□□□ -0.445e-6■□□□□ 10.9
PABPN1Q86U42 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC10.79□□□□□ -0.685e-6■□□□□ 10.9
PABPN1Q86U42 MLXIPL-210ENST00000476404 1921 ntTSL 228.66■■■□□ 2.183e-8■□□□□ 10.9
PABPN1Q86U42 DMTN-218ENST00000522148 616 ntTSL 548.82■■■■■ 5.412e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-211ENST00000518816 997 ntTSL 241.28■■■■■ 4.22e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-225ENST00000544365 1335 ntTSL 540.24■■■■■ 4.032e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-219ENST00000495920 456 ntTSL 339.29■■■■□ 3.882e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-219ENST00000522340 593 ntTSL 236.69■■■■□ 3.462e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-212ENST00000519333 579 ntTSL 436.51■■■■□ 3.442e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-222ENST00000523623 581 ntTSL 335.61■■■■□ 3.292e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-208ENST00000517418 977 ntTSL 235.58■■■■□ 3.292e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-216ENST00000520174 1057 ntTSL 535.58■■■■□ 3.292e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-213ENST00000519850 587 ntTSL 434.02■■■■□ 3.042e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-221ENST00000523300 601 ntTSL 433.75■■■□□ 2.992e-7■□□□□ 10.8
PABPN1Q86U42 DMTN-210ENST00000517804 813 ntTSL 532.02■■■□□ 2.722e-7■□□□□ 10.8
PABPN1Q86U42 MINK1-206ENST00000572304 559 ntTSL 428.12■■■□□ 2.092e-7■□□□□ 10.8
PABPN1Q86U42 RELA-220ENST00000532999 1341 ntTSL 527.85■■■□□ 2.055e-12■□□□□ 10.8
PABPN1Q86U42 DMTN-217ENST00000520856 589 ntTSL 326.91■■□□□ 1.92e-7■□□□□ 10.8
PABPN1Q86U42 APEH-213ENST00000480772 703 ntTSL 226.55■■□□□ 1.842e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-216ENST00000488268 631 ntTSL 323.06■■□□□ 1.282e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-217ENST00000492992 370 ntTSL 321.47■■□□□ 1.032e-7■□□□□ 10.8
PABPN1Q86U42 TMEM150A-205ENST00000422458 803 ntTSL 321.22■□□□□ 0.992e-7■□□□□ 10.8
PABPN1Q86U42 PRPSAP1-211ENST00000588364 1004 ntTSL 519.47■□□□□ 0.712e-7■□□□□ 10.8
PABPN1Q86U42 AC005261.2-201ENST00000593427 4258 ntBASIC8.14□□□□□ -1.112e-7■□□□□ 10.8
PABPN1Q86U42 EXOC3L4-202ENST00000559116 460 ntTSL 532.53■■■□□ 2.83e-9■□□□□ 10.8
PABPN1Q86U42 HDAC10-217ENST00000496235 885 ntTSL 540.55■■■■■ 4.081e-7■□□□□ 10.8
PABPN1Q86U42 CLASRP-205ENST00000585432 290 ntTSL 234.9■■■■□ 3.181e-8■□□□□ 10.8
PABPN1Q86U42 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.515e-26■□□□□ 10.8
PABPN1Q86U42 ACTB-207ENST00000462494 2245 ntTSL 526.74■■□□□ 1.875e-26■□□□□ 10.8
PABPN1Q86U42 ACTB-204ENST00000425660 1845 ntTSL 1 (best)26.73■■□□□ 1.875e-26■□□□□ 10.8
PABPN1Q86U42 ACTB-208ENST00000464611 715 ntTSL 514.54□□□□□ -0.085e-26■□□□□ 10.8
PABPN1Q86U42 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC34.99■■■■□ 3.191e-6■□□□□ 10.8
PABPN1Q86U42 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC31.93■■■□□ 2.71e-6■□□□□ 10.8
PABPN1Q86U42 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC22.55■■□□□ 1.29e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.129e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.89e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-224ENST00000530481 3914 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.649e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-232ENST00000628542 4247 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.619e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.469e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.379e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC13.47□□□□□ -0.259e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-206ENST00000452150 2994 ntTSL 1 (best)10.31□□□□□ -0.769e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.99e-14■□□□□ 10.8
PABPN1Q86U42 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC8.63□□□□□ -1.039e-14■□□□□ 10.8
PABPN1Q86U42 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC40.53■■■■■ 4.087e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-202ENST00000371520 1606 ntTSL 1 (best)36.25■■■■□ 3.397e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-208ENST00000476477 1676 ntTSL 230.91■■■□□ 2.547e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.367e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-205ENST00000463923 663 ntTSL 327.02■■□□□ 1.927e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC26.75■■□□□ 1.877e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-204ENST00000460612 2645 ntTSL 226.52■■□□□ 1.847e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-224ENST00000543419 555 ntTSL 318.21■□□□□ 0.517e-7■□□□□ 10.8
PABPN1Q86U42 ECHDC2-220ENST00000498544 985 ntTSL 233.75■■■□□ 2.997e-7■□□□□ 10.8
PABPN1Q86U42 RABL6-205ENST00000435930 3328 ntTSL 224.27■■□□□ 1.481e-6■□□□□ 10.8
PABPN1Q86U42 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC18.04■□□□□ 0.483e-9■□□□□ 10.8
PABPN1Q86U42 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.453e-9■□□□□ 10.8
PABPN1Q86U42 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC17.81■□□□□ 0.443e-9■□□□□ 10.8
PABPN1Q86U42 ERBB2-206ENST00000578373 4523 ntTSL 1 (best)17.64■□□□□ 0.413e-9■□□□□ 10.8
PABPN1Q86U42 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC16.31■□□□□ 0.23e-9■□□□□ 10.8
PABPN1Q86U42 VWCE-201ENST00000301770 3368 ntTSL 1 (best)23.13■■□□□ 1.298e-9■□□□□ 10.8
PABPN1Q86U42 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.048e-9■□□□□ 10.8
PABPN1Q86U42 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC17.3■□□□□ 0.368e-9■□□□□ 10.8
PABPN1Q86U42 CDK16-221ENST00000523543 533 ntTSL 221.07■□□□□ 0.963e-6■□□□□ 10.8
Retrieved 100 of 8,254 protein–RNA pairs in 69.8 ms