RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
CDK16-221ENST00000523543 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
CDK16-221ENST00000523543 ABCC9O60706 1549 aa22.47■■□□□ 1.19
CDK16-221ENST00000523543 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
CDK16-221ENST00000523543 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
CDK16-221ENST00000523543 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
CDK16-221ENST00000523543 NACADO15069 1562 aa21.91■■□□□ 1.1
CDK16-221ENST00000523543 DCAF8L2P0C7V8 631 aa21.9■■□□□ 1.1
CDK16-221ENST00000523543 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
CDK16-221ENST00000523543 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
CDK16-221ENST00000523543 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
CDK16-221ENST00000523543 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
CDK16-221ENST00000523543 BICRAQ9NZM4 1560 aa21.15■□□□□ 0.98
CDK16-221ENST00000523543 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.963e-6■□□□□ 10.8
CDK16-221ENST00000523543 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
CDK16-221ENST00000523543 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
CDK16-221ENST00000523543 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
CDK16-221ENST00000523543 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
CDK16-221ENST00000523543 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
CDK16-221ENST00000523543 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
CDK16-221ENST00000523543 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
CDK16-221ENST00000523543 PEG3Q9GZU2 1588 aa20.32■□□□□ 0.84
CDK16-221ENST00000523543 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
CDK16-221ENST00000523543 SMARCA2P51531 1590 aa20.28■□□□□ 0.84
CDK16-221ENST00000523543 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
CDK16-221ENST00000523543 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
CDK16-221ENST00000523543 WIZO95785 1651 aa20.2■□□□□ 0.82
CDK16-221ENST00000523543 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
CDK16-221ENST00000523543 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
CDK16-221ENST00000523543 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
CDK16-221ENST00000523543 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
CDK16-221ENST00000523543 CCDC88BA6NC98 1476 aa19.82■□□□□ 0.76
CDK16-221ENST00000523543 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
CDK16-221ENST00000523543 CFTRP13569 1480 aa19.64■□□□□ 0.73
CDK16-221ENST00000523543 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
CDK16-221ENST00000523543 NESP48681 1621 aa19.58■□□□□ 0.72
CDK16-221ENST00000523543 PDS5BQ9NTI5 1447 aa19.46■□□□□ 0.71
CDK16-221ENST00000523543 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
CDK16-221ENST00000523543 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
CDK16-221ENST00000523543 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
CDK16-221ENST00000523543 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
CDK16-221ENST00000523543 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
CDK16-221ENST00000523543 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
CDK16-221ENST00000523543 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
CDK16-221ENST00000523543 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
CDK16-221ENST00000523543 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
CDK16-221ENST00000523543 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
CDK16-221ENST00000523543 WDR62O43379 1518 aa19.17■□□□□ 0.66
CDK16-221ENST00000523543 CUX1P39880 1505 aa19.17■□□□□ 0.66
CDK16-221ENST00000523543 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
CDK16-221ENST00000523543 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
CDK16-221ENST00000523543 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
CDK16-221ENST00000523543 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
CDK16-221ENST00000523543 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
CDK16-221ENST00000523543 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
CDK16-221ENST00000523543 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
CDK16-221ENST00000523543 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CDK16-221ENST00000523543 CUX2O14529 1486 aa19.02■□□□□ 0.63
CDK16-221ENST00000523543 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
CDK16-221ENST00000523543 IFT140Q96RY7 1462 aa18.94■□□□□ 0.62
CDK16-221ENST00000523543 SOGA1O94964 1423 aa18.93■□□□□ 0.62
CDK16-221ENST00000523543 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
CDK16-221ENST00000523543 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
CDK16-221ENST00000523543 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
CDK16-221ENST00000523543 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
CDK16-221ENST00000523543 ZNF608Q9ULD9 1512 aaPredicted RBP18.8■□□□□ 0.6
CDK16-221ENST00000523543 TDRD9Q8NDG6 1382 aaKnown RBP18.78■□□□□ 0.6
CDK16-221ENST00000523543 KIF27Q86VH2 1401 aa18.76■□□□□ 0.59
CDK16-221ENST00000523543 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
CDK16-221ENST00000523543 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.597e-6■■□□□ 12.2
CDK16-221ENST00000523543 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
CDK16-221ENST00000523543 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
CDK16-221ENST00000523543 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
CDK16-221ENST00000523543 EEA1Q15075 1411 aa18.69■□□□□ 0.58
CDK16-221ENST00000523543 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
CDK16-221ENST00000523543 IGF1RP08069 1367 aa18.66■□□□□ 0.58
CDK16-221ENST00000523543 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
CDK16-221ENST00000523543 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
CDK16-221ENST00000523543 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
CDK16-221ENST00000523543 MAGI1Q96QZ7 1491 aaPredicted RBP18.59■□□□□ 0.57
CDK16-221ENST00000523543 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
CDK16-221ENST00000523543 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
CDK16-221ENST00000523543 FHAD1B1AJZ9 1412 aa18.55■□□□□ 0.56
CDK16-221ENST00000523543 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
CDK16-221ENST00000523543 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
CDK16-221ENST00000523543 CARMIL1Q5VZK9 1371 aa18.54■□□□□ 0.56
CDK16-221ENST00000523543 CUL7Q14999 1698 aa18.53■□□□□ 0.56
CDK16-221ENST00000523543 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
CDK16-221ENST00000523543 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.55
CDK16-221ENST00000523543 KIF21BO75037 1637 aa18.45■□□□□ 0.54
CDK16-221ENST00000523543 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
CDK16-221ENST00000523543 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
CDK16-221ENST00000523543 FBLN2P98095 1184 aa18.38■□□□□ 0.53
CDK16-221ENST00000523543 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
CDK16-221ENST00000523543 NUP160Q12769 1436 aa18.37■□□□□ 0.53
CDK16-221ENST00000523543 CHD1O14646 1710 aa18.35■□□□□ 0.53
CDK16-221ENST00000523543 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
CDK16-221ENST00000523543 KIAA0586Q9BVV6 1533 aa18.28■□□□□ 0.52
CDK16-221ENST00000523543 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
CDK16-221ENST00000523543 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms