RNA–Protein interactions for RNA: ENST00000628542.2

EPB41L2-232, Transcript of erythrocyte membrane protein band 4.1 like 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene EPB41L2, Length 4,247 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L2-232ENST00000628542 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
EPB41L2-232ENST00000628542 NISCHQ9Y2I1 1504 aa20.38■□□□□ 0.85
EPB41L2-232ENST00000628542 ABCC9O60706 1549 aa19.19■□□□□ 0.66
EPB41L2-232ENST00000628542 SHROOM4Q9ULL8 1493 aa19■□□□□ 0.63
EPB41L2-232ENST00000628542 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.619e-14■□□□□ 10.8
EPB41L2-232ENST00000628542 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
EPB41L2-232ENST00000628542 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
EPB41L2-232ENST00000628542 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
EPB41L2-232ENST00000628542 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
EPB41L2-232ENST00000628542 MYT1Q01538 1121 aa17.85■□□□□ 0.45
EPB41L2-232ENST00000628542 RANGAP1P46060 587 aaPredicted RBP17.77■□□□□ 0.44
EPB41L2-232ENST00000628542 FBLN2P98095 1184 aa17.64■□□□□ 0.41
EPB41L2-232ENST00000628542 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
EPB41L2-232ENST00000628542 ATP1B4Q9UN42 357 aaPredicted RBP17.43■□□□□ 0.38
EPB41L2-232ENST00000628542 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
EPB41L2-232ENST00000628542 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
EPB41L2-232ENST00000628542 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
EPB41L2-232ENST00000628542 HRCP23327 699 aa17.3■□□□□ 0.36
EPB41L2-232ENST00000628542 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
EPB41L2-232ENST00000628542 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
EPB41L2-232ENST00000628542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
EPB41L2-232ENST00000628542 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
EPB41L2-232ENST00000628542 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
EPB41L2-232ENST00000628542 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
EPB41L2-232ENST00000628542 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
EPB41L2-232ENST00000628542 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
EPB41L2-232ENST00000628542 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
EPB41L2-232ENST00000628542 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
EPB41L2-232ENST00000628542 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
EPB41L2-232ENST00000628542 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
EPB41L2-232ENST00000628542 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
EPB41L2-232ENST00000628542 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
EPB41L2-232ENST00000628542 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
EPB41L2-232ENST00000628542 APLP2Q06481 763 aa16.76■□□□□ 0.27
EPB41L2-232ENST00000628542 NACADO15069 1562 aa16.74■□□□□ 0.27
EPB41L2-232ENST00000628542 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
EPB41L2-232ENST00000628542 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
EPB41L2-232ENST00000628542 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
EPB41L2-232ENST00000628542 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
EPB41L2-232ENST00000628542 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
EPB41L2-232ENST00000628542 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
EPB41L2-232ENST00000628542 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
EPB41L2-232ENST00000628542 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
EPB41L2-232ENST00000628542 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
EPB41L2-232ENST00000628542 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
EPB41L2-232ENST00000628542 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
EPB41L2-232ENST00000628542 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
EPB41L2-232ENST00000628542 ITGAEP38570 1179 aa16.36■□□□□ 0.21
EPB41L2-232ENST00000628542 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
EPB41L2-232ENST00000628542 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
EPB41L2-232ENST00000628542 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
EPB41L2-232ENST00000628542 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
EPB41L2-232ENST00000628542 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
EPB41L2-232ENST00000628542 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
EPB41L2-232ENST00000628542 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
EPB41L2-232ENST00000628542 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
EPB41L2-232ENST00000628542 ESF1Q9H501 851 aaKnown RBP16.22■□□□□ 0.19
EPB41L2-232ENST00000628542 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
EPB41L2-232ENST00000628542 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
EPB41L2-232ENST00000628542 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
EPB41L2-232ENST00000628542 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
EPB41L2-232ENST00000628542 SMARCA2P51531 1590 aa16.16■□□□□ 0.18
EPB41L2-232ENST00000628542 BCANQ96GW7 911 aa16.15■□□□□ 0.18
EPB41L2-232ENST00000628542 LOC105371045A0A1W2PR82 267 aa16.13■□□□□ 0.17
EPB41L2-232ENST00000628542 MLECQ14165 292 aa16.1■□□□□ 0.17
EPB41L2-232ENST00000628542 NESP48681 1621 aa16.07■□□□□ 0.16
EPB41L2-232ENST00000628542 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
EPB41L2-232ENST00000628542 DIEXFQ68CQ4 756 aaKnown RBP16.06■□□□□ 0.16
EPB41L2-232ENST00000628542 EIF4G1Q04637 1599 aaKnown RBP16.06■□□□□ 0.16
EPB41L2-232ENST00000628542 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
EPB41L2-232ENST00000628542 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
EPB41L2-232ENST00000628542 ATAD2BQ9ULI0 1458 aa15.99■□□□□ 0.15
EPB41L2-232ENST00000628542 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
EPB41L2-232ENST00000628542 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.15
EPB41L2-232ENST00000628542 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
EPB41L2-232ENST00000628542 FAM50AQ14320 339 aaKnown RBP15.92■□□□□ 0.14
EPB41L2-232ENST00000628542 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
EPB41L2-232ENST00000628542 PLEKHG5O94827 1062 aa15.89■□□□□ 0.14
EPB41L2-232ENST00000628542 ANP32EQ9BTT0 268 aa15.89■□□□□ 0.13
EPB41L2-232ENST00000628542 FAM69CQ0P6D2 419 aa15.86■□□□□ 0.13
EPB41L2-232ENST00000628542 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
EPB41L2-232ENST00000628542 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
EPB41L2-232ENST00000628542 SOGA1O94964 1423 aa15.85■□□□□ 0.13
EPB41L2-232ENST00000628542 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.13
EPB41L2-232ENST00000628542 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
EPB41L2-232ENST00000628542 DNAJC5Q9H3Z4 198 aa15.81■□□□□ 0.12
EPB41L2-232ENST00000628542 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
EPB41L2-232ENST00000628542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.127e-7■■□□□ 12.5
EPB41L2-232ENST00000628542 JPH4Q96JJ6 628 aa15.79■□□□□ 0.12
EPB41L2-232ENST00000628542 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
EPB41L2-232ENST00000628542 NEFLP07196 543 aa15.77■□□□□ 0.12
EPB41L2-232ENST00000628542 PLEKHD1A6NEE1 506 aa15.77■□□□□ 0.11
EPB41L2-232ENST00000628542 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.118e-11■■■■□ 19.8
EPB41L2-232ENST00000628542 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
EPB41L2-232ENST00000628542 CUX2O14529 1486 aa15.72■□□□□ 0.11
EPB41L2-232ENST00000628542 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
EPB41L2-232ENST00000628542 CNGB1Q14028 1251 aaPredicted RBP15.71■□□□□ 0.11
EPB41L2-232ENST00000628542 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.11
EPB41L2-232ENST00000628542 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
EPB41L2-232ENST00000628542 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms