Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.662e-11■■■□□ 16.1
SND1Q7KZF4 SLC52A2-212ENST00000533662 1106 ntTSL 225.37■■□□□ 1.657e-8■■■□□ 16.1
SND1Q7KZF4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.89■■□□□ 1.572e-11■■■□□ 16.1
SND1Q7KZF4 TRAP1-207ENST00000571804 781 ntTSL 524.05■■□□□ 1.442e-11■■■□□ 16.1
SND1Q7KZF4 TRAP1-215ENST00000576106 555 ntTSL 423.64■■□□□ 1.372e-11■■■□□ 16.1
SND1Q7KZF4 NIP7-205ENST00000563364 436 ntTSL 221.27■■□□□ 19e-8■■■□□ 16.1
SND1Q7KZF4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.64■□□□□ 0.92e-11■■■□□ 16.1
SND1Q7KZF4 TRAP1-211ENST00000574941 558 ntTSL 420.37■□□□□ 0.852e-11■■■□□ 16.1
SND1Q7KZF4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.722e-11■■■□□ 16.1
SND1Q7KZF4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.41e-7■■■□□ 16.1
SND1Q7KZF4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.277e-8■■■□□ 16.1
SND1Q7KZF4 GRPEL1-202ENST00000504920 2195 ntTSL 216.02■□□□□ 0.157e-8■■■□□ 16.1
SND1Q7KZF4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.147e-8■■■□□ 16.1
SND1Q7KZF4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.122e-6■■■□□ 16.1
SND1Q7KZF4 NIP7-206ENST00000565034 639 ntTSL 315.31■□□□□ 0.049e-8■■■□□ 16.1
SND1Q7KZF4 AP2M1-212ENST00000461733 1470 ntTSL 215.18■□□□□ 0.022e-11■■■□□ 16.1
SND1Q7KZF4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.09■□□□□ 0.011e-7■■■□□ 16.1
SND1Q7KZF4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.022e-11■■■□□ 16.1
SND1Q7KZF4 ALG3-209ENST00000462735 704 ntTSL 214.88□□□□□ -0.037e-8■■■□□ 16.1
SND1Q7KZF4 CHID1-224ENST00000534254 1019 ntTSL 513.97□□□□□ -0.176e-7■■■□□ 16.1
SND1Q7KZF4 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.212e-6■■■□□ 16.1
SND1Q7KZF4 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.242e-11■■■□□ 16.1
SND1Q7KZF4 CHID1-219ENST00000531859 834 ntTSL 513.41□□□□□ -0.266e-7■■■□□ 16.1
SND1Q7KZF4 G3BP2-201ENST00000357854 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.282e-6■■■□□ 16.1
SND1Q7KZF4 GRPEL1-203ENST00000509696 884 ntTSL 213.04□□□□□ -0.327e-8■■■□□ 16.1
SND1Q7KZF4 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC12.84□□□□□ -0.357e-8■■■□□ 16.1
SND1Q7KZF4 NIP7-201ENST00000254940 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.389e-8■■■□□ 16.1
SND1Q7KZF4 NDFIP2-202ENST00000465762 698 ntTSL 312.3□□□□□ -0.447e-8■■■□□ 16.1
SND1Q7KZF4 DDX24-207ENST00000555762 5573 ntTSL 1 (best)12.15□□□□□ -0.477e-8■■■□□ 16.1
SND1Q7KZF4 GRPEL1-201ENST00000264954 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.517e-8■■■□□ 16.1
SND1Q7KZF4 TRAP1-216ENST00000576335 645 ntTSL 511.72□□□□□ -0.532e-11■■■□□ 16.1
SND1Q7KZF4 CHID1-210ENST00000526714 976 ntTSL 511.15□□□□□ -0.626e-7■■■□□ 16.1
SND1Q7KZF4 AP2M1-222ENST00000621863 1305 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.662e-11■■■□□ 16.1
SND1Q7KZF4 SLC38A5-208ENST00000494034 525 ntTSL 510.72□□□□□ -0.694e-7■■■□□ 16.1
SND1Q7KZF4 TRAP1-206ENST00000571538 587 ntTSL 410.46□□□□□ -0.732e-11■■■□□ 16.1
SND1Q7KZF4 ALG3-210ENST00000463495 347 ntTSL 310.2□□□□□ -0.787e-8■■■□□ 16.1
SND1Q7KZF4 MRPL13-205ENST00000521648 703 ntTSL 29.88□□□□□ -0.837e-8■■■□□ 16.1
SND1Q7KZF4 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC9.83□□□□□ -0.849e-8■■■□□ 16.1
SND1Q7KZF4 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC9.07□□□□□ -0.967e-8■■■□□ 16.1
SND1Q7KZF4 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC9.05□□□□□ -0.967e-8■■■□□ 16.1
SND1Q7KZF4 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.977e-8■■■□□ 16.1
SND1Q7KZF4 MRPL13-206ENST00000522717 480 ntTSL 28.56□□□□□ -1.047e-8■■■□□ 16.1
SND1Q7KZF4 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC8.15□□□□□ -1.17e-8■■■□□ 16.1
SND1Q7KZF4 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC8.14□□□□□ -1.117e-8■■■□□ 16.1
SND1Q7KZF4 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.09□□□□□ -1.117e-8■■■□□ 16.1
SND1Q7KZF4 NIP7-207ENST00000567202 646 ntTSL 38.04□□□□□ -1.129e-8■■■□□ 16.1
SND1Q7KZF4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.152e-6■■■□□ 16.1
SND1Q7KZF4 NIP7-204ENST00000562523 760 ntTSL 35.71□□□□□ -1.59e-8■■■□□ 16.1
SND1Q7KZF4 MRPL13-207ENST00000613356 2367 ntTSL 25.54□□□□□ -1.527e-8■■■□□ 16.1
SND1Q7KZF4 C2-215ENST00000486124 2800 ntTSL 511.82□□□□□ -0.525e-13■■■□□ 16.1
SND1Q7KZF4 AL512328.1-201ENST00000412344 536 ntTSL 3 BASIC10.97□□□□□ -0.651e-323■■■□□ 16.1
SND1Q7KZF4 SLC38A1-207ENST00000549633 1076 ntTSL 1 (best)21.69■■□□□ 1.064e-7■■■□□ 16.1
SND1Q7KZF4 GPAA1-206ENST00000526233 489 ntTSL 514.61□□□□□ -0.071e-7■■■□□ 16.1
SND1Q7KZF4 CCL20-204ENST00000489160 673 ntTSL 38.81□□□□□ -11e-7■■■□□ 16.1
SND1Q7KZF4 ECE1-210ENST00000526194 2172 ntTSL 1 (best)21.67■■□□□ 1.062e-6■■■□□ 16.1
SND1Q7KZF4 P4HB-211ENST00000477607 1110 ntTSL 1 (best)15.93■□□□□ 0.141e-23■■■□□ 16.1
SND1Q7KZF4 NCSTN-204ENST00000424645 958 ntTSL 510.63□□□□□ -0.716e-7■■■□□ 16.1
SND1Q7KZF4 NUCB1-203ENST00000411700 673 ntTSL 421.4■■□□□ 1.024e-8■■■□□ 16.1
SND1Q7KZF4 NUCB1-206ENST00000451312 563 ntTSL 218.42■□□□□ 0.547e-8■■■□□ 16.1
SND1Q7KZF4 NUCB1-205ENST00000443560 551 ntTSL 415.67■□□□□ 0.17e-8■■■□□ 16.1
SND1Q7KZF4 TF-213ENST00000494430 594 ntTSL 419.57■□□□□ 0.722e-19■■■□□ 16.1
SND1Q7KZF4 ATP6V0B-207ENST00000472505 411 ntTSL 513.6□□□□□ -0.236e-9■■■□□ 16
SND1Q7KZF4 LDLR-211ENST00000560173 389 ntTSL 39.69□□□□□ -0.862e-8■■■□□ 16
SND1Q7KZF4 CLSTN3-212ENST00000541770 568 ntTSL 38.94□□□□□ -0.982e-7■■■□□ 16
SND1Q7KZF4 CLN3-208ENST00000561505 495 ntTSL 1 (best)16.99■□□□□ 0.312e-7■■■□□ 16
SND1Q7KZF4 CLN3-264ENST00000637985 764 ntTSL 516.93■□□□□ 0.32e-7■■■□□ 16
SND1Q7KZF4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.78■■□□□ 1.561e-8■■■□□ 16
SND1Q7KZF4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.141e-8■■■□□ 16
SND1Q7KZF4 ALG1-205ENST00000591783 742 ntTSL 420.34■□□□□ 0.857e-8■■■□□ 16
SND1Q7KZF4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.075e-6■■■□□ 16
SND1Q7KZF4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.46■□□□□ 0.232e-11■■■□□ 16
SND1Q7KZF4 TMEM101-206ENST00000590905 573 ntTSL 515.31■□□□□ 0.042e-11■■■□□ 16
SND1Q7KZF4 TMEM101-202ENST00000585950 682 ntTSL 313.56□□□□□ -0.242e-11■■■□□ 16
SND1Q7KZF4 TMEM101-208ENST00000592127 576 ntTSL 410.61□□□□□ -0.712e-11■■■□□ 16
SND1Q7KZF4 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.353e-7■■■□□ 16
SND1Q7KZF4 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.473e-7■■■□□ 16
SND1Q7KZF4 GLG1-205ENST00000561942 674 ntTSL 27.68□□□□□ -1.182e-9■■■□□ 16
SND1Q7KZF4 MXRA8-210ENST00000478517 846 ntTSL 316.46■□□□□ 0.233e-6■■■□□ 16
SND1Q7KZF4 MXRA8-207ENST00000474033 1171 ntTSL 1 (best)14.07□□□□□ -0.163e-6■■■□□ 16
SND1Q7KZF4 SLC16A3-216ENST00000583025 955 ntTSL 219.94■□□□□ 0.781e-17■■■□□ 16
SND1Q7KZF4 ABHD2-205ENST00000565066 845 ntTSL 517.27■□□□□ 0.366e-12■■■□□ 16
SND1Q7KZF4 FN1-213ENST00000456923 3720 ntTSL 27.29□□□□□ -1.242e-6■■■□□ 16
SND1Q7KZF4 FN1-224ENST00000492816 9171 ntTSL 56.12□□□□□ -1.432e-6■■■□□ 16
SND1Q7KZF4 DDB1-204ENST00000535147 2789 ntTSL 211.42□□□□□ -0.582e-7■■■□□ 16
SND1Q7KZF4 DDB1-211ENST00000538280 227 ntTSL 310.02□□□□□ -0.812e-7■■■□□ 16
SND1Q7KZF4 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC9.66□□□□□ -0.861e-7■■■□□ 16
SND1Q7KZF4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.191e-7■■■□□ 16
SND1Q7KZF4 SC5D-205ENST00000527762 589 ntTSL 416.48■□□□□ 0.235e-7■■■□□ 16
SND1Q7KZF4 TMED3-204ENST00000543455 1483 ntTSL 219.12■□□□□ 0.653e-11■■■□□ 16
SND1Q7KZF4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.593e-11■■■□□ 16
SND1Q7KZF4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.59■□□□□ 0.573e-11■■■□□ 16
SND1Q7KZF4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.18□□□□□ -1.263e-11■■■□□ 16
SND1Q7KZF4 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-7■■■□□ 16
SND1Q7KZF4 VCP-207ENST00000493886 2942 ntTSL 214.97□□□□□ -0.012e-7■■■□□ 16
SND1Q7KZF4 P4HB-207ENST00000472244 858 ntTSL 519.29■□□□□ 0.681e-23■■■□□ 16
SND1Q7KZF4 ADPGK-205ENST00000562823 514 ntTSL 421.96■■□□□ 1.111e-6■■■□□ 16
SND1Q7KZF4 ADPGK-211ENST00000569058 575 ntTSL 419.76■□□□□ 0.751e-6■■■□□ 16
SND1Q7KZF4 ADPGK-203ENST00000562286 556 ntTSL 419.57■□□□□ 0.721e-6■■■□□ 16
SND1Q7KZF4 ADPGK-209ENST00000567733 525 ntTSL 514.8□□□□□ -0.041e-6■■■□□ 16
SND1Q7KZF4 PIGT-242ENST00000639286 861 ntTSL 513.99□□□□□ -0.177e-27■■■□□ 16
Retrieved 100 of 13,567 protein–RNA pairs in 138.1 ms