RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
NIP7-204ENST00000562523 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
NIP7-204ENST00000562523 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
NIP7-204ENST00000562523 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
NIP7-204ENST00000562523 FOXD1Q16676 465 aa19.34■□□□□ 0.69
NIP7-204ENST00000562523 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
NIP7-204ENST00000562523 MSH5O43196 834 aa18.13■□□□□ 0.49
NIP7-204ENST00000562523 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
NIP7-204ENST00000562523 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
NIP7-204ENST00000562523 ADRA2BP18089 450 aa18.05■□□□□ 0.48
NIP7-204ENST00000562523 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
NIP7-204ENST00000562523 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
NIP7-204ENST00000562523 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
NIP7-204ENST00000562523 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
NIP7-204ENST00000562523 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
NIP7-204ENST00000562523 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
NIP7-204ENST00000562523 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
NIP7-204ENST00000562523 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
NIP7-204ENST00000562523 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
NIP7-204ENST00000562523 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
NIP7-204ENST00000562523 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
NIP7-204ENST00000562523 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
NIP7-204ENST00000562523 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
NIP7-204ENST00000562523 C1QBPQ07021 282 aaKnown RBP15.23■□□□□ 0.03
NIP7-204ENST00000562523 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
NIP7-204ENST00000562523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
NIP7-204ENST00000562523 KCNA4P22459 653 aa15□□□□□ -0.01
NIP7-204ENST00000562523 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
NIP7-204ENST00000562523 CAPN15O75808 1086 aa14.63□□□□□ -0.07
NIP7-204ENST00000562523 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
NIP7-204ENST00000562523 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
NIP7-204ENST00000562523 DSG3P32926 999 aa14.46□□□□□ -0.09
NIP7-204ENST00000562523 APLP2Q06481 763 aa14.41□□□□□ -0.1
NIP7-204ENST00000562523 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
NIP7-204ENST00000562523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
NIP7-204ENST00000562523 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
NIP7-204ENST00000562523 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
NIP7-204ENST00000562523 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
NIP7-204ENST00000562523 ABCB7O75027 752 aa14.27□□□□□ -0.13
NIP7-204ENST00000562523 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
NIP7-204ENST00000562523 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
NIP7-204ENST00000562523 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
NIP7-204ENST00000562523 POLA2Q14181 598 aa13.97□□□□□ -0.17
NIP7-204ENST00000562523 POTEHQ6S545 545 aa13.9□□□□□ -0.18
NIP7-204ENST00000562523 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
NIP7-204ENST00000562523 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
NIP7-204ENST00000562523 ZBTB22O15209 634 aa13.75□□□□□ -0.21
NIP7-204ENST00000562523 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
NIP7-204ENST00000562523 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
NIP7-204ENST00000562523 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
NIP7-204ENST00000562523 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
NIP7-204ENST00000562523 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
NIP7-204ENST00000562523 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
NIP7-204ENST00000562523 FBLN2P98095 1184 aa13.35□□□□□ -0.27
NIP7-204ENST00000562523 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
NIP7-204ENST00000562523 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
NIP7-204ENST00000562523 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
NIP7-204ENST00000562523 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
NIP7-204ENST00000562523 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
NIP7-204ENST00000562523 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
NIP7-204ENST00000562523 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
NIP7-204ENST00000562523 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
NIP7-204ENST00000562523 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
NIP7-204ENST00000562523 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
NIP7-204ENST00000562523 HAX1O00165 279 aa13.04□□□□□ -0.32
NIP7-204ENST00000562523 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
NIP7-204ENST00000562523 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
NIP7-204ENST00000562523 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
NIP7-204ENST00000562523 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
NIP7-204ENST00000562523 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
NIP7-204ENST00000562523 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
NIP7-204ENST00000562523 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
NIP7-204ENST00000562523 EVX2Q03828 476 aa12.8□□□□□ -0.36
NIP7-204ENST00000562523 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
NIP7-204ENST00000562523 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
NIP7-204ENST00000562523 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
NIP7-204ENST00000562523 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
NIP7-204ENST00000562523 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
NIP7-204ENST00000562523 GABBR2O75899 941 aa12.52□□□□□ -0.41
NIP7-204ENST00000562523 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
NIP7-204ENST00000562523 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
NIP7-204ENST00000562523 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
NIP7-204ENST00000562523 CLCN6P51797 869 aa12.3□□□□□ -0.44
NIP7-204ENST00000562523 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
NIP7-204ENST00000562523 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
NIP7-204ENST00000562523 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
NIP7-204ENST00000562523 LHX8Q68G74 356 aa12.24□□□□□ -0.45
NIP7-204ENST00000562523 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
NIP7-204ENST00000562523 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
NIP7-204ENST00000562523 PROM2Q8N271 834 aa12.18□□□□□ -0.46
NIP7-204ENST00000562523 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
NIP7-204ENST00000562523 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
NIP7-204ENST00000562523 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
NIP7-204ENST00000562523 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
NIP7-204ENST00000562523 MIER1Q8N108 512 aa12.08□□□□□ -0.48
NIP7-204ENST00000562523 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
NIP7-204ENST00000562523 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
NIP7-204ENST00000562523 FKBP8Q14318 412 aa11.96□□□□□ -0.49
NIP7-204ENST00000562523 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
NIP7-204ENST00000562523 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms