RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 AEBP2Q6ZN18 517 aaPredicted RBP24.25■■□□□ 1.47
CCL20-204ENST00000489160 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
CCL20-204ENST00000489160 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
CCL20-204ENST00000489160 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
CCL20-204ENST00000489160 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
CCL20-204ENST00000489160 FOXD1Q16676 465 aa19.1■□□□□ 0.65
CCL20-204ENST00000489160 ADRA2BP18089 450 aa18.39■□□□□ 0.53
CCL20-204ENST00000489160 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
CCL20-204ENST00000489160 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
CCL20-204ENST00000489160 MSH5O43196 834 aa17.68■□□□□ 0.42
CCL20-204ENST00000489160 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
CCL20-204ENST00000489160 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
CCL20-204ENST00000489160 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
CCL20-204ENST00000489160 MAPK8IP2Q13387 824 aaPredicted RBP16.66■□□□□ 0.26
CCL20-204ENST00000489160 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
CCL20-204ENST00000489160 KCNA4P22459 653 aa16.63■□□□□ 0.25
CCL20-204ENST00000489160 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
CCL20-204ENST00000489160 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
CCL20-204ENST00000489160 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
CCL20-204ENST00000489160 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
CCL20-204ENST00000489160 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
CCL20-204ENST00000489160 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
CCL20-204ENST00000489160 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
CCL20-204ENST00000489160 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
CCL20-204ENST00000489160 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
CCL20-204ENST00000489160 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
CCL20-204ENST00000489160 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
CCL20-204ENST00000489160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCL20-204ENST00000489160 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
CCL20-204ENST00000489160 ZBTB22O15209 634 aa15.27■□□□□ 0.04
CCL20-204ENST00000489160 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
CCL20-204ENST00000489160 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
CCL20-204ENST00000489160 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
CCL20-204ENST00000489160 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
CCL20-204ENST00000489160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
CCL20-204ENST00000489160 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
CCL20-204ENST00000489160 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
CCL20-204ENST00000489160 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
CCL20-204ENST00000489160 APLP2Q06481 763 aa14.89□□□□□ -0.03
CCL20-204ENST00000489160 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
CCL20-204ENST00000489160 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
CCL20-204ENST00000489160 CAPN15O75808 1086 aa14.65□□□□□ -0.06
CCL20-204ENST00000489160 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
CCL20-204ENST00000489160 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
CCL20-204ENST00000489160 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
CCL20-204ENST00000489160 DSG3P32926 999 aa14.39□□□□□ -0.11
CCL20-204ENST00000489160 POLA2Q14181 598 aa14.34□□□□□ -0.11
CCL20-204ENST00000489160 ABCB7O75027 752 aa14.33□□□□□ -0.12
CCL20-204ENST00000489160 ZBTB12Q9Y330 459 aaPredicted RBP14.18□□□□□ -0.14
CCL20-204ENST00000489160 FBLN2P98095 1184 aa14.13□□□□□ -0.15
CCL20-204ENST00000489160 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
CCL20-204ENST00000489160 FKBP8Q14318 412 aa13.95□□□□□ -0.18
CCL20-204ENST00000489160 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
CCL20-204ENST00000489160 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
CCL20-204ENST00000489160 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
CCL20-204ENST00000489160 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
CCL20-204ENST00000489160 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
CCL20-204ENST00000489160 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
CCL20-204ENST00000489160 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
CCL20-204ENST00000489160 POTEHQ6S545 545 aa13.67□□□□□ -0.22
CCL20-204ENST00000489160 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
CCL20-204ENST00000489160 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
CCL20-204ENST00000489160 PROM2Q8N271 834 aa13.55□□□□□ -0.24
CCL20-204ENST00000489160 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCL20-204ENST00000489160 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
CCL20-204ENST00000489160 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
CCL20-204ENST00000489160 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
CCL20-204ENST00000489160 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
CCL20-204ENST00000489160 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
CCL20-204ENST00000489160 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
CCL20-204ENST00000489160 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
CCL20-204ENST00000489160 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
CCL20-204ENST00000489160 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
CCL20-204ENST00000489160 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
CCL20-204ENST00000489160 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
CCL20-204ENST00000489160 MIER1Q8N108 512 aa13.07□□□□□ -0.32
CCL20-204ENST00000489160 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
CCL20-204ENST00000489160 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
CCL20-204ENST00000489160 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCL20-204ENST00000489160 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
CCL20-204ENST00000489160 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
CCL20-204ENST00000489160 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
CCL20-204ENST00000489160 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
CCL20-204ENST00000489160 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
CCL20-204ENST00000489160 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
CCL20-204ENST00000489160 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
CCL20-204ENST00000489160 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCL20-204ENST00000489160 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
CCL20-204ENST00000489160 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
CCL20-204ENST00000489160 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
CCL20-204ENST00000489160 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
CCL20-204ENST00000489160 NUBP1P53384 320 aa12.72□□□□□ -0.37
CCL20-204ENST00000489160 PKD2Q13563 968 aa12.71□□□□□ -0.37
CCL20-204ENST00000489160 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
CCL20-204ENST00000489160 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
CCL20-204ENST00000489160 GSE1Q14687 1217 aa12.63□□□□□ -0.39
CCL20-204ENST00000489160 DCAF8Q5TAQ9 597 aa12.62□□□□□ -0.39
CCL20-204ENST00000489160 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
CCL20-204ENST00000489160 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
CCL20-204ENST00000489160 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms